Abstract

On-going airway inflammation is characteristic for the pathophysiology of chronic obstructive pulmonary disease (COPD). However, the key factors determining the decrease in lung function, an important clinical parameter of COPD, are not clear. Genome-wide linkage analyses provide evidence for significant linkage to airway obstruction susceptibility loci on chromosome 8p23, the location of the human defensin gene cluster. Moreover, a genetic variation in the defensin beta 1 (DEFB1) gene was found to be associated with COPD. Therefore, we hypothesized that DEFB1 is differently regulated and expressed in human lungs during COPD progression. Gene expression of DEFB1 was assessed in bronchial epithelium and BAL fluid cells of healthy controls and patients with COPD and using bisulfite sequencing and ChIP analysis, the epigenetic control of DEFB1 mRNA expression was investigated. We can demonstrate that DEFB1 mRNA expression was significantly increased in bronchopulmonary specimen of patients with COPD (n = 34) vs. healthy controls (n = 10) (p<0.0001). Furthermore, a significant correlation could be detected between DEFB1 and functional parameters such as FEV1 (p = 0.0024) and the FEV1/VC ratio (p = 0.0005). Upregulation of DEFB1 mRNA was paralleled by changes in HDAC1-3, HDAC5 and HDAC8 mRNA expression. Whereas bisulfite sequencing revealed no differences in the methylation state of DEFB1 promoter between patients with COPD and controls, ChIP analysis showed that enhanced DEFB1 mRNA expression was associated with the establishment of an active histone code. Thus, expression of human DEFB1 is upregulated and related to the decrease in pulmonary function in patients with COPD.

Highlights

  • Chronic obstructive pulmonary disease (COPD) is a complex inflammatory disorder influenced by environmental factors and multiple genes

  • Absolute transcript levels of defensin beta 1 (DEFB1) mRNA, normalized to the amount of b2-M, were higher in samples of bronchial epithelial cell biopsy from patients with COPD compared to the healthy controls (p,0.0001)

  • Genetic variations of DEFB1 identified in the 1654 G/A locus in the DEFB1 exon 2 coding for a valine to isoleucine substitution at position 38 (Val38Ile) and in the 668 C/G locus in 39 flank of DEFB1 mRNA were found to be associated with COPD [5,25]

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Summary

Introduction

Chronic obstructive pulmonary disease (COPD) is a complex inflammatory disorder influenced by environmental factors (especially cigarette smoking) and multiple genes. The clinical course of patients with COPD is closely related to the progression of pulmonary inflammation and the decline in lung function, which is an important clinical parameter of the disease. Genome-wide linkage analyses in the Boston Early-Onset COPD study have provided significant evidence for linkage of airway obstruction to chromosome 8 [2] and, in particular, for forced expiratory volume in 1 second (FEV1) to the region 23 of chromosome 8p [3]. Little is known about specific components of the innate immune system that play a role in the progression of COPD. We hypothesized that DEFB1 is differently regulated and expressed in the lung during progression of COPD

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