Abstract

Predictive models in acute care settings must immediately recognize precipitous changes in a patient's status when presented with data reflecting such changes. Recurrent neural networks (RNN) have become popular for clinical decision support models but exhibit a delayed response to acute events. New information must propagate through the RNN's cell state before the total impact is reflected in the model's predictions. Input data perseveration is a method to train more responsive RNN-based models. Input data is replicated k times during training and deployment. Each replication propagates through the cell state and output of the RNN, but only the output at the final replication is maintained and broadcast as the prediction for evaluation. De-identified Electronic Medical Records (EMR) of 12, 826 patients admitted to a tertiary care pediatric academic center between 01/2009-02/2019 were analyzed. A baseline Long Short-Term Memory (LSTM) model ( k=1), four LSTMs with increasing amounts of input data perseveration ( k=2 to k=5), and an LSTM with an attention mechanism were trained to predict ICU-mortality. Performance of models was compared using Area Under the Receiver Operating Characteristic Curve (AUROC) after increasing periods of observation from one to 12 hours. The average variation of the change in predicted mortality immediately following defined acute events measured responsiveness. The AUROC gains due to input perseveration were larger at the earlier times of prediction ( ≤ 6 hours), increasing at the first hour from 0.77 with no input data perseveration to 0.83 when k=5. An LSTM with k=5 was $2-3$ times more responsive to acute events than a baseline LSTM.

Highlights

  • Long Short-Term Memory (LSTM) models [3] are a type of Recurrent Neural Network (RNN) architecture and have become increasingly popular for modeling tasks in clinical settings [4]–[10]

  • Data for this work were extracted from de-identified observational clinical data collected in Electronic Medical Records (EMR, Cerner) in the Pediatric Intensive Care Unit (PICU) of Children’s Hospital Los Angeles (CHLA) between January 2009 and February 2019

  • In the first episode, the patient had a rapid desaturation event (Sp02 dropping from 100% to 33%) 6 hours after intensive care unit (ICU) admission

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Summary

Introduction

Predictive models in these settings must immediately recognize precipitous changes in a patient’s state when presented with data reflecting such changes [1], [2]. Acquired patient data must be integrated quickly with previous data and the model’s predictions rapidly updated to inform clinical decisions in a timely fashion. Long Short-Term Memory (LSTM) models [3] are a type of Recurrent Neural Network (RNN) architecture and have become increasingly popular for modeling tasks in clinical settings [4]–[10]. They previously have been shown to achieve significantly higher predictive performance

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