Abstract

Computer Tomography (CT) is an imaging procedure that combines many X-ray measurements taken from different angles. The segmentation of areas in the CT images provides a valuable aid to physicians and radiologists in order to better provide a patient diagnose. The CT scans of a body torso usually include different neighboring internal body organs. Deep learning has become the state-of-the-art in medical image segmentation. For such techniques, in order to perform a successful segmentation, it is of great importance that the network learns to focus on the organ of interest and surrounding structures and also that the network can detect target regions of different sizes. In this paper, we propose the extension of a popular deep learning methodology, Convolutional Neural Networks (CNN), by including deep supervision and attention gates. Our experimental evaluation shows that the inclusion of attention and deep supervision results in consistent improvement of the tumor prediction accuracy across the different datasets and training sizes while adding minimal computational overhead.

Highlights

  • The daily work of a radiologist consists of visually analyzing multiple anatomical structures in medical images

  • The amount of data acquired via Computer tomography (CT) and Magnetic resonance (MR) is ever-growing (Sharma and Aggarwal, 2010)

  • There is an increasing interest in reliable automatic systems that assist radiological experts in clinical diagnosis and treatment planning. One of such aids to experts is medical image segmentation, which consists of voxel-wise annotation of target structures in the image and it is present in many recent research work

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Summary

Introduction

The daily work of a radiologist consists of visually analyzing multiple anatomical structures in medical images. Manual measurements are time-consuming and could result in inter-operator and intra-operator variability (Sharma and Aggarwal, 2010; Jimenez-del-Toro et al, 2016). There is an increasing interest in reliable automatic systems that assist radiological experts in clinical diagnosis and treatment planning. One of such aids to experts is medical image segmentation, which consists of voxel-wise annotation of target structures in the image and it is present in many recent research work. Medical image competition challenges allow to the computer vision and machine learning experts to access and evaluate medical image data (Jimenez-del-Toro et al, 2016)

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