Abstract

Beta-lactam- and in particular carbapenem-resistant Enterobacteriaceae represent a major public health threat. Despite strong variation of resistance across geographical settings, there is limited understanding of the underlying drivers. To assess these drivers, we developed a transmission model of cephalosporin- and carbapenem-resistant Klebsiella pneumoniae. The model is parameterized using antibiotic consumption and demographic data from eleven European countries and fitted to the resistance rates for Klebsiella pneumoniae for these settings. The impact of potential drivers of resistance is then assessed in counterfactual analyses. Based on reported consumption data, the model could simultaneously fit the prevalence of extended-spectrum beta-lactamase-producing and carbapenem-resistant Klebsiella pneumoniae (ESBL and CRK) across eleven European countries over eleven years. The fit could explain the large between-country variability of resistance in terms of consumption patterns and fitted differences in hospital transmission rates. Based on this fit, a counterfactual analysis found that reducing nosocomial transmission and antibiotic consumption in the hospital had the strongest impact on ESBL and CRK prevalence. Antibiotic consumption in the community also affected ESBL prevalence but its relative impact was weaker than inpatient consumption. Finally, we used the model to estimate a moderate fitness cost of CRK and ESBL at the population level. This work highlights the disproportionate role of antibiotic consumption in the hospital and of nosocomial transmission for resistance in gram-negative bacteria at a European level. This indicates that infection control and antibiotic stewardship measures should play a major role in limiting resistance even at the national or regional level.

Highlights

  • Carbapenem-resistant and extended-spectrum beta-lactamase (ESBL) producing Enterobacteriaceae represent serious threat in the current antimicrobial resistance crisis and are highlighted by the World Health Organization (WHO) in the most recent “Prioritization of Pathogens to Guide Discovery” [1]

  • We find that among potentially modifiable drivers, inpatient antibiotic consumption and nosocomial transmission rates have the strongest impact on resistance

  • The second group consists of countries with high prevalence of resistance to 3rd generation cephalosporins but low prevalence of resistance to carbapenems (Croatia, France, Hungary, Portugal)

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Summary

Introduction

Carbapenem-resistant and extended-spectrum beta-lactamase (ESBL) producing Enterobacteriaceae represent serious threat in the current antimicrobial resistance crisis and are highlighted by the World Health Organization (WHO) in the most recent “Prioritization of Pathogens to Guide Discovery” [1]. Enterobacteriaceae are common commensal flora, in the gastrointestinal tract, and are typically exposed to any antibiotic treatment administered to an individual. They have developed resistance to most of the commonly used antibiotics. Last-resort drugs such as colistin generally remain effective, though there have already been reported cases of Enterobacteriaceae resistant to both carbapenems and colistin [3]. While newer drugs, such as ceftazidime-avibactam, have been introduced, widespread dissemination of carbapenem-resistant genes may herald the beginning of a postantibiotic era [4], at least for the Enterobacteriaceae species in question

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