Abstract

Tryptophan and tyrosine radical intermediates play crucial roles in many biological charge transfer processes. Particularly in flavoprotein photochemistry, short-lived reaction intermediates can be studied by the complementary techniques of ultrafast visible and infrared spectroscopy. The spectral properties of tryptophan radical are well established, and the formation of neutral tyrosine radicals has been observed in many biological processes. However, only recently, the formation of a cation tyrosine radical was observed by transient visible spectroscopy in a few systems. Here, we assigned the infrared vibrational markers of the cationic and neutral tyrosine radical at 1483 and 1502 cm−1 (in deuterated buffer), respectively, in a variant of the bacterial methyl transferase TrmFO, and in the native glucose oxidase. In addition, we studied a mutant of AppABLUF blue-light sensor domain from Rhodobacter sphaeroides in which only a direct formation of the neutral radical was observed. Our studies highlight the exquisite sensitivity of transient infrared spectroscopy to low concentrations of specific radicals.

Highlights

  • Charge transfer processes are omnipresent in biological reaction pathways

  • We employed ultrafast infrared absorption measurements to identify the vibrational markers of the cation and neutral tyrosine radical in C51A and C51A/Y343F variants of TrmFO

  • Comparing our previous visible transient absorption data measured on TrmFO mutants and glucose oxidase (GOX) with the infrared measurements, we identify the 1483 cm−1 vibrational mode as a vibrational marker of ­TyrOH⋅+

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Summary

Introduction

Charge transfer processes are omnipresent in biological reaction pathways. Alongside specialized redox-active cofactors, in many cases amino acid residues—mostly aromaticPushing the limits of flash photolysis to unravel the secrets of biological electron and proton transfer - a topical issue in honour of Klaus Brettel.residues like tryptophan and tyrosine—play important roles in reaction intermediates. Cationic and neutral radicals are thought to be important They can be investigated using spectroscopic methods, including EPR, visible and infrared spectroscopy. The latter two can be combined with very high time resolution, allowing the characterization of very short-lived intermediates in photo-activatable systems. The pKa of the tryptophan cation radical is ~ 4 and its deprotonation happens in a couple of hundreds of nanoseconds [2] This process, and similar subsequently studied processes in the related cryptochrome blue-light sensors [6,7,8,9,10,11] have been extensively studied by polarization and spectrally resolved transient visible spectroscopy. We employed transient infrared spectroscopy to characterize the photocycle of the BLUF photoreceptor

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