Identification of an unusual deletion within homologous repeats of human reticulocyte ß-spectrin and probable peptide polymorphism

Abstract

We screened two different human reticulocyte cDNA libraries with ß-spectrins(ßSp)-specific polyclonal antibodies and with our original radiolabeled human BSP cDNA probe (encoding ßSp). Of the 20 independent clones, the largest had about a 2.5-kb insert corresponding to the deduced amino acid (aa) sequence of the ß-7 to ß-14 repetitive segments. Among these segments, segment 12 was 7 aa shorter than the other repetitive segments. We showed that this truncation was not a result of ( i) cloning artifact, ( ii) alternate splicing, or ( iii) common genomic polymorphism by additional examination of 14 individual human chromosomes. Recently, another laboratory described the BSP nucleotide (nt) sequence overlapping partially with our sequence. These overlapping sequences were homologous with the exception with the exeption of two nt differences at the positions 1342 and 1514. The discrepancy at nt 1342 changes the His to Arg. This newly derived probe has been used to find an additional example of BSP restriction fragment length polymorphism.