Abstract

Intracellular de novo protein folding is assisted by cellular networks of molecular chaperones. In Escherichia coli, cooperation between the chaperones trigger factor (TF) and DnaK is central to this process. Accordingly, the simultaneous deletion of both chaperone-encoding genes leads to severe growth and protein folding defects. Herein, we took advantage of such defective phenotypes to further elucidate the interactions of chaperone networks in vivo. We show that disruption of the TF/DnaK chaperone pathway is efficiently rescued by overexpression of the redox-regulated chaperone Hsp33. Consistent with this observation, the deletion of hslO, the Hsp33 structural gene, is no longer tolerated in the absence of the TF/DnaK pathway. However, in contrast with other chaperones like GroEL or SecB, suppression by Hsp33 was not attributed to its potential overlapping general chaperone function(s). Instead, we show that overexpressed Hsp33 specifically binds to elongation factor-Tu (EF-Tu) and targets it for degradation by the protease Lon. This synergistic action of Hsp33 and Lon was responsible for the rescue of bacterial growth in the absence of TF and DnaK, by presumably restoring the coupling between translation and the downstream folding capacity of the cell. In support of this hypothesis, we show that overexpression of the stress-responsive toxin HipA, which inhibits EF-Tu, also rescues bacterial growth and protein folding in the absence of TF and DnaK. The relevance for such a convergence of networks of chaperones and proteases acting directly on EF-Tu to modulate the intracellular rate of protein synthesis in response to protein aggregation is discussed.

Highlights

  • De novo protein folding is assisted by essential networks of molecular chaperones

  • In support of this hypothesis, we show that overexpression of the stress-responsive toxin HipA, which inhibits elongation factor-Tu (EF-Tu), rescues bacterial growth and protein folding in the absence of trigger factor (TF) and DnaK

  • We show that the redox regulated and heat shock-induced chaperone Hsp33 can efficiently suppress the bacterial growth and protein folding defects observed in the absence of both TF and DnaK, revealing a role for Hsp33 as a major participant of the E. coli chaperone network

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Summary

Background

De novo protein folding is assisted by essential networks of molecular chaperones. Results: Overproduction of Hsp controls EF-Tu stability allowing bacterial growth without trigger factor and DnaK. In agreement with the existence of such a chaperone network, overexpression of GroEL/GroES significantly suppresses both the temperature-sensitive phenotype and the protein folding defect observed in the simultaneous absence of both TF and DnaK [15, 17, 18] In this case, overexpression of GroEL/GroES likely favors interaction with nonobligate GroEL substrates, restore cell viability. Overexpression of the export chaperone SecB is capable of replacing DnaK and TF, suggesting that this chaperone can play an important role in the cellular chaperone network in response to cytoplasmic protein misfolding or aggregation [19] In this respect it is interesting to note that both GroEL and SecB were recently isolated as highly enriched DnaK interacting proteins (“interactors”), further emphasizing the functional cooperation among these chaperones [11]. In contrast with our previous results concerning GroEL and SecB, we show that Hsp acts indirectly, by interacting with the essential elongation factor Tu (EF-Tu) and targeting it for degradation by the protease Lon

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