Abstract
Since a racemic mixture of chiral nucleotides frustrates the enzymeless extension of RNA and DNA, the origin of homochirality must be intimately connected with the origin of life. Homochirality theories have elected to presume abiotic mechanisms for prebiotic enantiomer enrichment and post amplification, but none, so far, has been generally accepted. Here I present a novel hypothesis for the procurement of homochirality from an asymmetry in right- over left-circularly polarized photon-induced denaturing of RNA and DNA at the Archean ocean surface as temperatures descended below that of RNA and DNA melting. This asymmetry is attributed to the small excess of right-handed circularly polarized submarine light during the afternoon, when surface water temperatures were highest and thus most conducive to photon-induced denaturing, and to a negative circular dichroism band extending from 230 to 270 nm for small oligos of RNA and DNA. Because D-nucleic acids have greater affinity for L-tryptophan due to stereochemistry, and because D-RNA/DNA+L-tryptophan complexes have an increased negative circular dichroism band between 230 and 270 nm, the homochirality of tryptophan can also be explained by this hypothesis. A numerical model is presented, demonstrating the efficacy of such a mechanism in procuring homochirality of RNA or DNA from an original racemic solution in as little as 270 Archean years.
Highlights
Molecules with no plane of symmetry come in two distinct geometrical, but energy-degenerate, forms or mirror images called “enantiomers,” which are labeled as being right (D)- or left (L)-handed depending on their preference for absorption of, respectively, right-handed or left-handed circularly polarized light around their absorption maximum
Because D-nucleic acids have greater affinity for L-tryptophan due to stereochemistry, and because D-RNA/DNA+L-tryptophan complexes have an increased negative circular dichroism band between 230 and 270 nm, the homochirality of tryptophan can be explained by this hypothesis
The following section describes a novel non-equilibrium thermodynamic solution to the homochirality problem in which the asymmetry arises as a natural part of the early RNA or DNA
Summary
Molecules with no plane of symmetry come in two distinct geometrical, but energy-degenerate, forms or mirror images called “enantiomers,” which are labeled as being right (D)- or left (L)-handed depending on their preference for absorption of, respectively, right-handed or left-handed circularly polarized light around their absorption maximum. Incorporation of only the correct enantiomer of the nucelotides into RNA or DNA is guaranteed by an unfailing enzymatic chiral selection process. Such enzymes, could not have been available at the very beginnings of life. RNA or DNA extension is severely adversely affected by a racemic (equal concentration of both enantiomers) solution of nucleotides, principally because incorporated nucelotides of the wrong chirality act as extension.
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