Abstract
HIV infection can be effectively controlled by anti-retroviral therapy (ART) in most patients. However therapy must be continued for life, because interruption of ART leads to rapid recrudescence of infection from long-lived latently infected cells. A number of approaches are currently being developed to ‘purge’ the reservoir of latently infected cells in order to either eliminate infection completely, or significantly delay the time to viral recrudescence after therapy interruption. A fundamental question in HIV research is how frequently the virus reactivates from latency, and thus how much the reservoir might need to be reduced to produce a prolonged antiretroviral-free HIV remission. Here we provide the first direct estimates of the frequency of viral recrudescence after ART interruption, combining data from four independent cohorts of patients undergoing treatment interruption, comprising 100 patients in total. We estimate that viral replication is initiated on average once every ≈6 days (range 5.1- 7.6 days). This rate is around 24 times lower than previous thought, and is very similar across the cohorts. In addition, we analyse data on the ratios of different ‘reactivation founder’ viruses in a separate cohort of patients undergoing ART-interruption, and estimate the frequency of successful reactivation to be once every 3.6 days. This suggests that a reduction in the reservoir size of around 50-70-fold would be required to increase the average time-to-recrudescence to about one year, and thus achieve at least a short period of anti-retroviral free HIV remission. Our analyses suggests that time-to-recrudescence studies will need to be large in order to detect modest changes in the reservoir, and that macaque models of SIV latency may have much higher frequencies of viral recrudescence after ART interruption than seen in human HIV infection. Understanding the mean frequency of recrudescence from latency is an important first step in approaches to prolong antiretroviral-free viral remission in HIV.
Highlights
The development of highly potent antiretroviral therapy (ART) for HIV means that the virus can be effectively controlled in most treated patients
During treatment of HIV infection the virus persists in infected cells in a quiescent or ‘latent’ state
A fundamental question is ‘how frequently does infectious virus emerge from the pool of latently infected cells?’, and how much would we need to reduce the number of latently infected cells to produce remission? Here we directly estimate the frequency of successful viral reactivation in four independent cohorts of patients undergoing treatment interruption
Summary
The development of highly potent antiretroviral therapy (ART) for HIV means that the virus can be effectively controlled in most treated patients. Clinical studies of LRA in HIV-infected patients on ART have shown the ability to significantly increase cell-associated unspliced HIV RNA and in some studies increase plasma HIV RNA. These studies have not resulted in decreases in HIV DNA—a crude surrogate marker of latently infected cells—or measurable reductions in various measurements of the latent reservoir or antiretroviral free HIV remission [5,6,7,8,9,10]. It is currently estimated that the reservoir of latently infected cells may be between one and 60 million cells [11,12,13] Complete elimination of this would require reducing the size of the reservoir by at least one million fold. Understanding factors that predict the duration of viral remission will be critical for the future design of eradication studies [14]
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