Abstract

Tracheoesophageal Fistula (TOF) is a congenital anomaly for which the cause is unknown in the majority of patients. OA/TOF is a variable feature in many (often mono-) genetic syndromes. Research using animal models targeting genes involved in candidate pathways often result in tracheoesophageal phenotypes. However, there is limited overlap in the genes implicated by animal models and those found in OA/TOF-related syndromic anomalies. Knowledge on affected pathways in animal models is accumulating, but our understanding on these pathways in patients lags behind. If an affected pathway is associated with both animals and patients, the mechanisms linking the genetic mutation, affected cell types or cellular defect, and the phenotype are often not well understood. The locus heterogeneity and the uncertainty of the exact heritability of OA/TOF results in a relative low diagnostic yield. OA/TOF is a sporadic finding with a low familial recurrence rate. As parents are usually unaffected, de novo dominant mutations seems to be a plausible explanation. The survival rates of patients born with OA/TOF have increased substantially and these patients start families; thus, the detection and a proper interpretation of these dominant inherited pathogenic variants are of great importance for these patients and for our understanding of OA/TOF aetiology.

Highlights

  • Oesophageal Atresia (OA) with or without Tracheoesophageal Fistula (TOF) (MIM 189960) is a developmental defect of the foregut that has a prevalence ranging between 1 and 4.5 per 10,000 live births [1,2]

  • Tracheoesophageal separation starts before lung bud formation: ventral primordial tracheal and dorsal oesophagus fields develop

  • The genes in groups 3 and 4 might be more prone to recessive variation compared with the genes in groups 1, 2, 5, and 6 Differences in these gene characteristics could be part of the reason why there is limited overlap between animal models and human OA/TOF phenotypes

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Summary

Introduction

Oesophageal Atresia (OA) with or without Tracheoesophageal Fistula (TOF) (MIM 189960) is a developmental defect of the foregut that has a prevalence ranging between 1 and 4.5 per 10,000 live births [1,2]. Biological networks involved in tracheoesophageal separation are increasingly unravelled [13,17] These advances could shed light on what goes wrong in the separation of the oesophagus and trachea during development in patients with OA/TOF. Tracheoesophageal separation starts before lung bud formation: ventral primordial tracheal (yellow) and dorsal oesophagus (blue) fields develop. The septum expands dorsally, resulting in the formation of oesophageal atresia without a fistula. The first septum expands dorsally, resulting in the formation of a proximal fistula and oesophageal atresia. A second septum forms and expands rostrally as well as dorsally, resulting in the formation of a distal fistula and oesophageal atresia. The middle septum expands dorsally, creating both a proximal and distal fistula as well as oesophageal atresia. A second septum forms and expands rostrally, resulting in the formation of a fistula. Four genes (Zinc Finger Homeobox 3 (ZFHX3), ERCC Excision Repair 1, Endonuclease Non-Catalytic Subunit (ERCC1), Glutaminase (GLS), and Lysine Methyltransferase 2D (KMT2D)) had a de novo mutation in more than one patient [26,27,29]

The Impact of De Novo Mutation on Human Disease and Animal Candidate Genes
De Novo Mutation in Isolated Phenotypes
De Novo Mutation in Complex Phenotypes
Discordant Monozygous Twins
Absence of Discordant Somatic Mutations in Blood
The Impact of De Novo Mutations during Adulthood
Barrett’s Oesophagus
Heritability of De Novo Mutations
Findings
Recommendations
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