Abstract

Reef-building corals are fundamental to the most diverse marine ecosystems, and the coral–dinoflagellate (zooxanthellae) associations on fine scale remains largely unknown. Spatial variation in the diversity of symbiotic dinoflagellates of two scleractinian coral species was studied in an upwelling region near Qinlan Harbor in eastern Hainan Island, China. Results showed that stress-tolerant Symbiodinium trenchi in individual colonies of Galaxea fascicularis occurred more frequently in shallow back-reef than in deep fore-reef. The higher symbiont diversity was found in colonies of G. fascicularis in shallow and close to the harbour mouth whereas the coral Pocillipora damicornis always harboured Symbiodinium internal transcribed spacer 2 (ITS2) types C1c or C42a. Furthermore, both corals were found to simultaneously contain Symbiodinium ITS2 types belonging to two distinct phylogenetic clades (C and D). This indicates that the distribution of genetically distinct Symbiodinium may correlate with light regime and possibly temperature in some (but not all) colonies at particular locations, which we interpret as holobiont acclimation to the local environmental conditions. Therefore, we conclude that reef-building corals can adapt to the local environment by harbouring genetically distinct symbionts but depend on their respective symbiont transmission modes.

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