Abstract

In the microbial community of decaying wood, yeasts are important for the recycling of nutrients. Nevertheless, information on their biodiversity in this niche in the Northern hemisphere is limited. Wood-colonising yeasts encounter identical and similar growth-inhibitory compounds as those in spent sulphite liquor (SSL), an energy-rich, acid hydrolysate and waste product from the paper industry, which may render them well-suited for cultivation in SSL. In the present study, yeasts were isolated from decaying wood on the Faroe Islands and identified based on sequence homology of the ITS and D1/D2 regions. Among the yeasts isolated, Candida argentea, Cystofilobasidium infirmominiatum, Naganishia albidosimilis, Naganishia onofrii, Holtermanniella takashimae and Goffeauzyma gastrica were new to decaying wood in cold and temperate climates. C. argentea and Rhodotorula are rarely-isolated species, with no previous documentation from cold and maritime climates. The isolates were further tested for growth in a medium with increasing concentrations of softwood SSL. Most grew in the presence of 10% SSL. Isolates of Debaryomyces sp., C. argentea and Rhodotorula sp. were the most tolerant. Representatives of Debaryomyces and Rhodotorula have previously been found in decaying wood. In contrast, the least tolerant isolates belonged to species that are rarely reported from decaying wood. The relative importance of individual inhibitors to yeast growth is discussed. To our knowledge, none of the present yeast species have previously been cultivated in SSL medium. Decaying wood can be a useful future source of yeasts for valorisation of various hydrolysates to industrial chemicals and biofuels.

Highlights

  • Wood-decaying microorganisms play a key role in the recycling of nutrients in forest ecosystems

  • Isolates FMYH004 and FBOB002 were identified as Goffeauzyma gastrica, FBOC004 as Holtermanniella takashimae and FXXA004 as Naganishia albidosimilis, respectively, by comparisons of concatenated D1/D2 and ITS sequences, and visualised by phylogenetic trees

  • The present study investigated the yeasts in decaying wood, isolated from twelve separate geographical locations on the Faroe Islands

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Summary

Introduction

Wood-decaying microorganisms play a key role in the recycling of nutrients in forest ecosystems. The relative amounts of the three major constituents of wood: cellulose, hemicellulose and lignin vary immensely among different plant species and types of lignocellulosic materials (Henriksson et al 2009; Stokland 2012). Yeasts that colonise decaying wood and leaf debris assimilate the monosaccharides resulting from the depolymerisation of polysaccharides; initially, those from hemicellulose and pectin, and subsequently, those from cellulose, as reviewed by Cadete et al (2017). The lignin component of wood is highly recalcitrant to biodegradation and consists of small monoaromatic units, which are relatively inaccessible and growth-inhibitory to microorganisms. There are yeasts that can metabolise this class of compounds (Middelhoven 1993; Sampaio 1999) By detoxifying these phenolic compounds, yeasts may create an environment that is conducive to other wood-degrading microorganisms

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