Abstract

Sound wildlife conservation decisions require sound information, and scientists increasingly rely on remotely collected data over large spatial scales, such as noninvasive genetic tagging (NGT). Grizzly bears (Ursus arctos), for example, are difficult to study at population scales except with noninvasive data, and NGT via hair trapping informs management over much of grizzly bears’ range. Considerable statistical effort has gone into estimating sources of heterogeneity, but detection error–arising when a visiting bear fails to leave a hair sample–has not been independently estimated. We used camera traps to survey grizzly bear occurrence at fixed hair traps and multi-method hierarchical occupancy models to estimate the probability that a visiting bear actually leaves a hair sample with viable DNA. We surveyed grizzly bears via hair trapping and camera trapping for 8 monthly surveys at 50 (2012) and 76 (2013) sites in the Rocky Mountains of Alberta, Canada. We used multi-method occupancy models to estimate site occupancy, probability of detection, and conditional occupancy at a hair trap. We tested the prediction that detection error in NGT studies could be induced by temporal variability within season, leading to underestimation of occupancy. NGT via hair trapping consistently underestimated grizzly bear occupancy at a site when compared to camera trapping. At best occupancy was underestimated by 50%; at worst, by 95%. Probability of false absence was reduced through successive surveys, but this mainly accounts for error imparted by movement among repeated surveys, not necessarily missed detections by extant bears. The implications of missed detections and biased occupancy estimates for density estimation–which form the crux of management plans–require consideration. We suggest hair-trap NGT studies should estimate and correct detection error using independent survey methods such as cameras, to ensure the reliability of the data upon which species management and conservation actions are based.

Highlights

  • Biodiversity loss is one of the primary conservation concerns of the 21st century [1,2,3]

  • Bears occupied about three-quarters of sampling sites in 2012 (ψ = 0.77; s.e. = 0.07) and 2013 (ψ = 0.71; s.e. = 0.05) according to best-supported models (Table 1; AICw2012 = 0.80; AICw2013 = 0.99)

  • Missed detections are a non-trivial problem inherent in all surveys, and we show that missed detections in noninvasive genetic tagging (NGT) hair-trapping surveys can bias occupancy estimates markedly, and through time

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Summary

Introduction

Biodiversity loss is one of the primary conservation concerns of the 21st century [1,2,3]. They are large and wide-ranging, have low reproductive rates, are sensitive to habitat fragmentation, and have been harvested or persecuted heavily since European colonization [7,8,9]. The need to detect and manage species declines has created a marked demand for inexpensive data collected over large spatial scales [10]. To meet this demand, mammal populations are often surveyed via noninvasive genetic tagging (NGT), which yields large volumes of inexpensive data on species’ occurrence [11]. Noninvasive genetic tagging data inform (for example) estimates of population size and density [14,15,16], habitat selection [17], and landscape genetics–the landscape-scale analysis of population connectivity and gene flow [18]

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