Abstract
In the present work, Chlamydomonas nivalis, a model species of snow algae, was used to illustrate the metabolic regulation mechanism of microalgae under nutrient deprivation stress. The seed culture was inoculated into the medium without nitrate or phosphate to reveal the cell responses by a metabolome profile analysis using gas chromatography time-of-flight mass spectrometry (GC/TOF-MS). One hundred and seventy-one of the identified metabolites clustered into five groups by the orthogonal partial least squares discriminant analysis (OPLS-DA) model. Among them, thirty of the metabolites in the nitrate-deprived group and thirty-nine of the metabolites in the phosphate-deprived group were selected and identified as “responding biomarkers” by this metabolomic approach. A significant change in the abundance of biomarkers indicated that the enhanced biosynthesis of carbohydrates and fatty acids coupled with the decreased biosynthesis of amino acids, N-compounds and organic acids in all the stress groups. The up- or down-regulation of these biomarkers in the metabolic network provides new insights into the global metabolic regulation and internal relationships within amino acid and fatty acid synthesis, glycolysis, the tricarboxylic acid cycle (TCA) and the Calvin cycle in the snow alga under nitrate or phosphate deprivation stress.
Highlights
Chlamydomonas nivalis, a typical unicellular green microalga, is distributed worldwide in the snowfield of polar regions and similar extreme environments, and it has attracted attention recently due to its application as a model species of snow algae for illustrating the cellular response mechanism to stress conditions [1]
Phosphorus limitation leads to the up-regulation of protein digestion associated with lipid accumulation, while the down-regulation of protein biosynthesis is associated with amino acid metabolism in the marine diatom Phaeodactylum tricornutum [9]
Gas chromatography time-of-flight mass spectrometry (GC/TOF-MS) is an effective method for metabolome profile analyses obtaining a global vision of the small molecules of metabolites due to its convenience and high accuracy in identifying and quantifying more than 100 metabolites in biological samples by a notably fast scan from a complicated matrix [13]
Summary
Chlamydomonas nivalis, a typical unicellular green microalga, is distributed worldwide in the snowfield of polar regions and similar extreme environments, and it has attracted attention recently due to its application as a model species of snow algae for illustrating the cellular response mechanism to stress conditions [1]. Gas chromatography time-of-flight mass spectrometry (GC/TOF-MS) is an effective method for metabolome profile analyses obtaining a global vision of the small molecules of metabolites (molecular weight
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