Abstract

Hereditary factors play a role in the development of colorectal cancer (CRC). Identification of germlinepredisposition can have implications on treatment and cancer prevention. This study aimedto determine the prevalence of pathogenic germline variants (PGVs) in CRC patients using a universal testing approach, association with clinical outcomes, and the uptake of family variant testing. We performed a prospective multisite study of germline sequencing using a more than 80-gene next-generation sequencing platform among CRC patients (not selected for age or family history) receiving care at Mayo Clinic Cancer Centers between April 1, 2018, and March 31,2020. Of 361 patients, the median age was 57 years (SD, 12.4 y), 43.5% were female, 82% were white, and 38.2% had stage IV disease. PGVs were found in 15.5% (n= 56) of patients, including 44 in moderate- and high-penetrance cancer susceptibility genes. Thirty-four (9.4%) patients had incremental clinically actionable findings that would not have been detected by practice guideline criteria or a CRC-specific gene panel. Only younger age at diagnosis was associated with the presence of PGVs (odds ratio, 1.99; 95% CI, 1.12-3.56). After a median follow-up period of 20.7 months, no differences in overall survival were seen between those with or without a PGV (P= .2). Eleven percent of patients had modifications in their treatment based on genetic findings. Family cascade testing was low (16%). Universal multigene panel testing in CRC was associated with a modest, but significant, detection of heritable mutations over guideline-based testing. One in 10 patients had changes in their management based on test results. Uptake of cascade family testing was low, which is a concerning observation that warrants further study.

Highlights

  • BACKGROUND & AIMSMETHODS: Hereditary factors play a role in the development of colorectal cancer (CRC)

  • Abbreviations used in this paper: CRC, colorectal cancer; FVT, family variant testing; HRD, homologous recombination deficiency; INTERCEPT, Interrogating Cancer using Proactive genetic Testing; MMR, mismatch repair; NCCN, National Comprehensive Cancer Network; NGS, next-generation sequencing; OR, odds ratio; Overall survival (OS), overall survival; poly-adenosine diphosphate ribose polymerase (PARP), polyadenosine diphosphate ribose polymerase; PGV, pathogenic germline variant; VUS, variant of unknown significance

  • The current study describes the cohort of 361 patients with a diagnosis of colorectal adenocarcinoma (2 cases were excluded from the original INTERCEPT cohort owing to a lack of complete medical records allowing for comprehensive in-house review of the pathologic diagnosis)

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Summary

Introduction

BACKGROUND & AIMSMETHODS: Hereditary factors play a role in the development of colorectal cancer (CRC). Identification of germline predisposition can have implications on treatment and cancer prevention. This study aimed to determine the prevalence of pathogenic germline variants (PGVs) in CRC patients using a universal testing approach, association with clinical outcomes, and the uptake of family variant testing. We performed a prospective multisite study of germline sequencing using a more than 80-gene next-generation sequencing platform among CRC patients (not selected for age or family history) receiving care at Mayo Clinic Cancer Centers between April 1, 2018, and March 31, 2020. Abbreviations used in this paper: CRC, colorectal cancer; FVT, family variant testing; HRD, homologous recombination deficiency; INTERCEPT, Interrogating Cancer using Proactive genetic Testing; MMR, mismatch repair; NCCN, National Comprehensive Cancer Network; NGS, next-generation sequencing; OR, odds ratio; OS, overall survival; PARP, polyadenosine diphosphate ribose polymerase; PGV, pathogenic germline variant; VUS, variant of unknown significance. The identification of germline predisposition can have important implications on cancer prevention and possibly treatment

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