Genome-Wide Characterization of Class III Peroxidases and Their Expression Profile During Mycorrhizal Symbiosis and Phosphorus Deprivation in Lettuce (Lactuca sativa L.)

Abstract

Lettuce cultivation requires high fertilizer inputs, which impact the environment and costs. Arbuscular mycorrhizal symbiosis (AMS) can reduce fertilizer use, enhance plant nutrition (especially phosphorus), and promote healthier plants. Class III peroxidases (PRXs) play crucial roles in various physiological processes and stress responses. However, their role in AMS and phosphorous (P) deficiency is still unclear. Our study identified 91 PRX genes in the lettuce genome (LsPRXs) and clustered them into eight subfamilies based on phylogenetic relationships. Evolutionary analysis indicated that tandem duplication was the main driver for LsPRX gene family expansion. Synteny analysis showed orthologous relationships of the PRX gene family between lettuce and potato, Arabidopsis, and maize, identifying 39, 28, and 3 shared PRXs, respectively. Transcriptomic data revealed that most LsPRX genes were more expressed in roots than in leaves and differentially expressed LsPRXs were found in response to AMS and P supply. Notably, 15% of LsPRX genes were differentially expressed in roots during mycorrhization. Gene expression network analysis highly correlated five LsPRXs (LsPRX17, LsPRX23, LsPRX24, LsPRX64, and LsPRX79) with genes involved in cell wall remodeling and reorganization during mycorrhization. Our results provide insights into the evolutionary history and functional roles of PRX genes in lettuce and identify candidate gene targets that may enhance the bio-stimulant effects of AMS and help to cope with P deficiency.