Genome Editing in Large Animals

Abstract

Genome editing in large animals has tremendous practical applications, from more accurate models for medical research through improved animal welfare and production efficiency. Although genetic modification in large animals has a 30-year history, until recently technical issues limited its utility. The original methods—pronuclear injection and integrating viruses—were plagued with problems associated with low efficiency, silencing, poor regulation of gene expression, and variability associated with random integration. With the advent of site-specific nucleases such as TAL effector-like nucleases and clustered regularly interspaced short palindromic repeat (CRISPR)/Cas9, precision editing became possible. When used on their own, these can be used to truncate or knockout genes through nonhomologous end joining with relatively high efficiency. When used with a template containing desired gene edits, these can be used to allow insertion of any desired changes to the genome through homologous recombination with substantially lower efficiency. Consideration must be given to the issues of marker sets and off-target effects. Somatic cell nuclear transfer is most commonly used to create animals from gene-edited cells, but direct zygote injection and use of spermatogonial stem cells are alternatives under development. In developing gene editing projects, priority must be given to understanding the potential for off-target or unexpected effects of planned edits, which have been common in the past. Because of the increasing technical sophistication with which it can be accomplished, genome editing is poised to revolutionize large animal genetics, but attention must be paid to the underlying biology to maximize benefit.