Abstract

Assessment of the diversity of reproductive traits and genetic variation is of great relevance to the conservation of genetic resources and management of silver fir (Abies alba) populations. We have evaluated reproductive characteristics associated with female cones and seed morphology, as well as seed germination after subjecting seeds to five storage methods, in nine Romanian populations of A. alba. The genetic diversity of the populations was assessed with 12 polymorphic simple sequence repeat (SSR) markers. We detected significant differences between populations for all reproductive traits and considerable differences in seed germination and storage methods; seed storage in wet sand was the method resulting in the highest germination in all populations. Genomic SSRs (gSSRs) were more informative on average than expressed sequence tag SSRs (EST-SSRs) in the populations studied. The nine populations were genetically diverse, with an average number of alleles (N) per SSR locus between 3.50 and 4.83. The observed heterozygosity (Ho) in the nine populations was always lower than the expected heterozygosity (He), which resulted in values of the inbreeding coefficient (Fis) between 0.261 and 0.709. Genetic distances between populations ranged between 0.077 and 0.410. The cluster analysis based on genetic distances did not group accessions according to their geographical proximity, and despite a positive trend, the correlation between geographic and genetic distances was non-significant. The results of an analysis of molecular variance (AMOVA) revealed that only 9.1% of the total molecular variance is attributable to differences between populations. This low degree of genetic differentiation between populations is confirmed by the intermingling of individuals of different populations in a principal coordinate analysis (PCoA). We found evidence of a positive relationship between He and germination, as well as a negative one between Fis and germination, suggesting that populations with low diversity and high consanguinity may have a reduced fitness and long-term viability. The results are relevant for the conservation and management of local genetic resources and populations, as well as for reforestation programmes of silver fir.

Highlights

  • In Europe, the genus Abies Mill. has a circum-Mediterranean distribution [1]

  • We evaluated the characteristics of the structures where the primary reproductive material is contained, seed germination using different storage systems, and assessed genetic diversity and genetic structure with simple sequence repeat (SSR) markers in nine populations of silver fir from Romania

  • We have evaluated the relationship between germination, an important parameter associated with fitness and population viability [27], and genetic parameters related to population diversity and inbreeding [28]

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Summary

Introduction

In Europe, the genus Abies Mill. has a circum-Mediterranean distribution [1]. Among Abies species, silver fir (Abies alba Mill.) is the only one with a broad range of distribution [1,2]. We evaluated the characteristics of the structures (female cones) where the primary reproductive material (seeds) is contained, seed germination using different storage systems, and assessed genetic diversity and genetic structure with simple sequence repeat (SSR) markers in nine populations of silver fir from Romania. Based on both datasets, we have evaluated the relationship between germination, an important parameter associated with fitness and population viability [27], and genetic parameters related to population diversity and inbreeding [28]. With 50 seeds per replicate, were used for each combination of population and storage method

DNA Extraction and SSR Genotyping
Data Analysis
F: CCATGTATGGTGCTCCTCCT R: CCTTCATTGCAGAAAAGCAA F: AGCATCCACATTCCGTAACC R
F: CAGATCCTCCCACATCCAAC R: TGACACCACAGGAAACCATC F
F: TTTGAACGGAAATCAAATTCC R: AAGAACGACACCATTCTCAC F
Characterisation of Silver Fir Female Cones
Seed Germination
SSR Characterisation
Genetic Relationships between Populations
Genetic Structure
Discussion
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