Abstract

Discriminating between inherited and non-inherited sporadic hearing loss is challenging. Here, we attempted to delineate genetic inheritance in simplex cases of severe-to-profound congenital hearing loss in Korean children. Variations in SLC26A4 and GJB2 in 28 children with bilateral severe-to-profound non-syndromic hearing loss (NSHL) without familial history were analyzed using Sanger sequencing. Genetic analysis of individuals without mutations in SLC26A4 and GJB2 was performed by whole exome sequencing (WES). Bi-allelic mutations in SLC26A4 and GJB2 were identified in 12 and 3 subjects, respectively. Of the 13 individuals without mutations in SLC26A4 and GJB2, 2 and 1 carried compound heterozygous mutations in MYO15A and CDH23, respectively. Thus, 64.3% (18/28) of individuals with NSHL were determined to be genetically predisposed. Individuals with sporadic severe-to-profound NSHL were found to mostly exhibit an autosomal recessive inheritance pattern. Novel causative candidate genes for NSHL were identified by analysis of WES data of 10 families without mutations in known causative genes. Bi-allelic mutations predisposing to NSHL were identified in 64.3% of subjects with sporadic severe-to-profound NSHL. Given that several causative genes for NSHL are still unidentified, genetic inheritance of sporadic congenital hearing loss could be more common than that indicated by our results.

Highlights

  • Hearing loss is a common sensorial disorder, with an incidence of 1 in 500–1000 among children[1]

  • We comprehensively evaluated the contribution of genetic predisposition to severe-to-profound sporadic congenital hearing loss by Sanger sequencing and Whole exome sequencing (WES)

  • This diagnostic rate is exceptionally higher compared with that reported in a previous study (37%) involving sporadic NSHL11

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Summary

Introduction

Hearing loss is a common sensorial disorder, with an incidence of 1 in 500–1000 among children[1]. Most individuals with AR-NSHL experience severe-to-profound congenital hearing loss[3,4]. Severe-to-profound congenital or prelingual hearing loss results in the delay of language and behavioural development at an early age[5]. Sporadic cases of severe-to-profound congenital hearing loss have been rarely weighted in previous targeted exon sequencing (TES) analyses. Whole exome sequencing (WES) has been successfully used for analysis of genetic factors for hearing loss[5,14], WES has facilitated the identification of novel genes associated with Mendelian disorders including hearing www.nature.com/scientificreports/. We aimed to establish a molecular diagnosis of sporadic congenital hearing loss in 28 individuals with severe-to-profound congenital NSHL (auditory hearing threshold >7​ 0 dB nHL) by genetic analysis by Sanger sequencing and WES

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