Genetic Mapping of Seed Traits Correlated with Seed Oil Percentage in Watermelon

Abstract

Egusi watermelon [Citrullus lanatus (Thunb.) Matsum. & Nakai subsp. mucosospermus var. egusi (C. Jeffrey) Mansf.] is known for its distinctive fleshy-pericarp seed phenotype and high seed oil percentage (SOP). The seed is part of the daily diet in West Africa where it is used in soups and stews or processed for cooking oil. Genetic mapping studies have revealed that most of the variation in SOP between egusi and normal, non-egusi seed is explained by the egusi (eg) locus, which is also associated with the unique seed phenotype. However, variation in SOP is also observed within egusi and normal seed types although the basis of this variation remains to be elucidated. A high correlation between kernel percentage (KP) and SOP has been observed in watermelon and other crops, and recent data also suggest an association between seed size and SOP in watermelon. The aim of this study was to elucidate the relationship among SOP, KP, and seed size traits in watermelon and to identify quantitative trait loci (QTL) associated with the latter traits to facilitate marker-assisted selection (MAS) for traits correlated with SOP. KP showed a significant (α = 0.05) positive correlation with SOP in both egusi and normal seed types, whereas seed size traits showed significant negative correlations with SOP. QTL associated with KP and seed size traits in normal seed were colocalized with a previously mapped locus for SOP on linkage group (LG) 2, but in egusi seed, a QTL explaining 33% of phenotypic variation in KP was localized on LG 7. The results of this study show that SOP in watermelon is correlated with KP and seed size, but KP is associated with different loci in normal and egusi seed phenotypes.