Abstract

Simple SummaryThe advent of genomic editing with CRISPR/Cas9 has transformed the way we manipulate the genome, and has facilitated the investigation of tumor cell biology in vitro and in vivo. Not only we can modify genome sequence to blunt an overactivated gene or correct a mutation, but also we may modulate gene expression using CRISPR/Cas system. In this review, we present the basics of CRISPR/Cas methodology, its components and how to start a CRISPR/Cas experiment; Moreover, we present how CRISPR/Cas methodology has been applied to study the function of coding and noncoding genes in thyroid cancer and provided insights into cancer biology.Important advances on the role of genetic alterations in thyroid cancer have been achieved in the last two decades. One key reason is linked to the development of technical approaches that allowed for the mimicking of genetic alterations in vitro and in vivo and, more recently, the gene editing methodology. The CRISPR/Cas methodology has emerged as a tangible tool for editing virtually any DNA sequence in the genome. To induce a double-strand break and programmable gene editing, Cas9 endonuclease is guided by a single-guide RNA (sgRNA) that is complementary to the target sequence in DNA. The gene editing per se occurs as the cells repair the broken DNA and may erroneously change the original DNA sequence. In this review, we explore the principles of the CRISPR/Cas system to facilitate an understanding of the mainstream technique and its applications in gene editing. Furthermore, we explored new applications of CRISPR/Cas for gene modulation without changing the DNA sequence and provided a Dry Lab experience for those who are interested in starting “CRISPRing” any given gene. In the last section, we will discuss the progress in the knowledge of thyroid cancer biology fostered by the CRISPR/Cas gene editing tools.

Highlights

  • Gene editing using the Cluster of Regularly Interspaced Palindromic Region (CRISPR)/CRISPR-associated genes (Cas) methodology has emerged as a promising tool to modify nearly any target DNA sequence in a genome, and has rapidly become an alternative to time-demanding methodologies such as zinc fingers nuclease (ZFN) and TALE nucleases (TALEN) [1]

  • Gene editing using the CRISPR/Cas methodology has emerged as a promising tool to modify nearly any target DNA sequence in a genome, and has rapidly become an alternative to time-demanding methodologies such as zinc fingers nuclease (ZFN) and TALE nucleases (TALEN) [1]

  • We first explore the fundamentals of the CRISPR/Cas system to facilitate an understanding of the technique and its application in gene editing

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Summary

Introduction

Gene editing using the CRISPR/Cas methodology has emerged as a promising tool to modify nearly any target DNA sequence in a genome, and has rapidly become an alternative to time-demanding methodologies such as zinc fingers nuclease (ZFN) and TALE nucleases (TALEN) [1]. The CRISPR array is transcribed into crRNA, a small RNA that contains a 20-nt specific sequence (targeting the foreign DNA) and a segment of repeats that interacts with trans-activating crRNA (tracrRNA). This RNA structure is loaded into the Interference Cas protein, Cas. Artificial changes to link both crRNA + tracrRNA structures resulted in the chimeric sgRNA that simplified the structural elements necessary for sgRNA loading in Cas (Figure 2) This modification resulted in a simple system in which the 20-nt DNA sequence specific for the target gene is cloned into a plasmid that transcribes the single-guide RNA (explored in the Dry Lab Section 3).

Why Cas9?
Mechanism behind Gene Editing
Dry-Lab
Cancer Cell Migration and Invasion
Epigenetics
Targeting Noncoding Genes in Thyroid Research
Perspectives
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