Abstract

The structurally related glutathione S-transferase isoforms GSTA1-1 and GSTA4-4 differ greatly in their relative catalytic promiscuity. GSTA1-1 is a highly promiscuous detoxification enzyme. In contrast, GSTA4-4 exhibits selectivity for congeners of the lipid peroxidation product 4-hydroxynonenal. The contribution of protein dynamics to promiscuity has not been studied. Therefore, hydrogen/deuterium exchange mass spectrometry (H/DX) and fluorescence lifetime distribution analysis were performed with glutathione S-transferases A1-1 and A4-4. Differences in local dynamics of the C-terminal helix were evident as expected on the basis of previous studies. However, H/DX demonstrated significantly greater solvent accessibility throughout most of the GSTA1-1 sequence compared with GSTA4-4. A Phe-111/Tyr-217 aromatic-aromatic interaction in A4-4, which is not present in A1-1, was hypothesized to increase core packing. "Swap" mutants that eliminate this interaction from A4-4 or incorporate it into A1-1 yield H/DX behavior that is intermediate between the wild type templates. In addition, the single Trp-21 residue of each isoform was exploited to probe the conformational heterogeneity at the intrasubunit domain-domain interface. Excited state fluorescence lifetime distribution analysis indicates that this core residue is more conformationally heterogeneous in GSTA1-1 than in GSTA4-4, and this correlates with greater stability toward urea denaturation for GSTA4-4. The fluorescence distribution and urea sensitivity of the mutant proteins were intermediate between the wild type templates. The results suggest that the differences in protein dynamics of these homologs are global. The results suggest also the possible importance of extensive conformational plasticity to achieve high levels of functional promiscuity, possibly at the cost of stability.

Highlights

  • For most enzymes, the molecular basis of promiscuity is not established

  • The results suggest a signifiare in good agreement with the hydrogen/deuterium exchange mass spectrometry (H/DX), and they indicate that cant increase in the conformational heterogeneity of Trp-21 in the aromatic interactions in the A1-1 mutant may form a stable GSTA1-1 compared with GSTA4-4

  • Upper limits for the S.E. values are Ϯ0.003 for the SAS with wild type (WT) proteins and Ϯ0.01 for W21F/F222W; for the center parameters, the upper limit of the S.E. is Ϯ0.025 for the wild type proteins and Ϯ0.176 for W21F/F222W

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Summary

EXPERIMENTAL PROCEDURES

Mutants were constructed using overlap extension PCR. For the GSTA1-1 V111F/R217Y mutant, the sequence of the primer containing the NdeI restriction site and the start codon was 5Ј-GAG-. These fits of the data represent a model in which the exchange of deuterium into each peptide is described by a sum of exponential rate processes (Equation 2). A1-1 mutant (supplemental materials, Fig. S3); 2) the highest distribution with a discrete short lifetime component, as is regions of root mean square fluctuation for each protein (not often observed for Trp residues in proteins (65). Trp-21 of Phe-111/Tyr-217 interaction of the A4-4 protein contributes to TABLE 1

Excited state fluorescence decay parameters
Findings
DISCUSSION
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