Abstract

Brain computation relies on effective interactions between ensembles of neurons. In neuroimaging, measures of functional connectivity (FC) aim at statistically quantifying such interactions, often to study normal or pathological cognition. Their capacity to reflect a meaningful variety of patterns as expected from neural computation in relation to cognitive processes remains debated. The relative weights of time-varying local neurophysiological dynamics versus static structural connectivity (SC) in the generation of FC as measured remains unsettled. Empirical evidence features mixed results: from little to significant FC variability and correlation with cognitive functions, within and between participants. We used a unified approach combining multivariate analysis, bootstrap and computational modeling to characterize the potential variety of patterns of FC and SC both qualitatively and quantitatively. Empirical data and simulations from generative models with different dynamical behaviors demonstrated, largely irrespective of FC metrics, that a linear subspace with dimension one or two could explain much of the variability across patterns of FC. On the contrary, the variability across BOLD time-courses could not be reduced to such a small subspace. FC appeared to strongly reflect SC and to be partly governed by a Gaussian process. The main differences between simulated and empirical data related to limitations of DWI-based SC estimation (and SC itself could then be estimated from FC). Above and beyond the limited dynamical range of the BOLD signal itself, measures of FC may offer a degenerate representation of brain interactions, with limited access to the underlying complexity. They feature an invariant common core, reflecting the channel capacity of the network as conditioned by SC, with a limited, though perhaps meaningful residual variability.

Highlights

  • The processing and routing of information in the brain are implemented through the interplay of two general constraints: 1) the specifics of physiological dynamics, controlling how connected neurons respond to each other locally, and 2) the entire wiring diagram of anatomical connections, channeling the possible exchange of information between neuronal ensembles according to the properties of its cables [1,2,3,4,5,6]

  • The human brain is characterized by both the way its neurons are connected and the way they emit signals to interact

  • We first characterized the variability of the patterns of structural connectivity (SC), correlation based functional connectivity (FC), and mutual information based FC across subjects

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Summary

Introduction

The processing and routing of information in the brain are implemented through the interplay of two general constraints: 1) the specifics of physiological dynamics, controlling how connected neurons respond to each other locally, and 2) the entire wiring diagram of anatomical connections, channeling the possible exchange of information between neuronal ensembles according to the properties of its cables [1,2,3,4,5,6]. In blood oxygen level dependent (BOLD) resting-state functional magnetic resonance imaging (rs-fMRI, where subjects passively lie in the magnet [16, 17]), measures of ‘functional connectivity’ (FC) have emerged as a convenient proxy to quantify functional patterns of interaction between neural ensembles [16, 18,19,20,21] In this scientific field, standard Pearson correlation has become a gold standard [22,23,24]; more elaborate measures, though rarely applied so far, have been proposed, such as mutual information as well as estimators of higher-order relationships [25,26,27,28,29,30]. The variability of FC patterns across time, as observed with sliding time windows shorter than a standard acquisition run (‘dynamic FC’) has been recently featured with relation to cognition [47]

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