Abstract

Here we report the cloning and functional characterization of eight members of the UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase gene family from Drosophila melanogaster (polypeptide GalNAc transferase = pgant1-8). Full-length cDNAs were isolated from a Drosophila embryonic library based on homology to known ppGaNTases. Alignments with characterized mammalian isoforms revealed strong sequence similarities between certain fly and mammalian isoforms, highlighting putative orthologues between the species. In vitro activity assays demonstrated biochemical transferase activity for each gene, with three isoforms requiring glycosylated substrates. Comparison of the activities of Drosophila and mammalian orthologues revealed conservation of substrate preferences against a panel of peptide and glycopeptide substrates. Furthermore, Edman degradation analysis demonstrated that preferred sites of GalNac addition were also conserved between certain fly and mammalian orthologues. Semi-quantitative PCR amplification of Drosophila cDNA revealed expression of most isoforms at each developmental stage, with some isoforms being less abundant at certain stages relative to others. In situ hybridization to Drosophila embryos revealed specific staining of pgant5 and pgant6 in the salivary glands and pgant5 in the developing hindgut. Additionally, pgant5 and pgant6 expression within the egg chamber was restricted to the follicle cells, cells known to be involved in egg formation and subsequent embryonic patterning. The characterization reported here provides additional insight into the use of this model system to dissect the biological role of this enzyme family in vivo during both fly and mammalian development.

Highlights

  • We report the cloning and functional characterization of eight members of the UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase gene family from Drosophila melanogaster

  • Estimates based on homology searches of the human and mouse genome data bases predict a total of 24 members of this enzyme family in mammals [1]

  • Isolation of ppGaNTase Full-length cDNAs—The amino acid consensus sequence SPTMAGGLFAVNRKYFQHLGEY, derived from the conserved region of previously characterized mammalian ppGaNTases, was used to perform a tBLASTn search against the existing Drosophila melanogaster genome data base present in NCBI to identify all potential members of this enzyme family

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Summary

THE JOURNAL OF BIOLOGICAL CHEMISTRY

35039 –35048, 2003 Printed in U.S.A. Functional Characterization and Expression Analysis of Members of the UDP-GalNAc:Polypeptide N-Acetylgalactosaminyltransferase Family from Drosophila melanogaster*. 13 distinct mammalian isoforms of this enzyme family have been functionally characterized, with each displaying a unique combination of expression patterns and well as substrate specificity. Given the potentially large size of the mammalian ppGaNTase family as well as overlapping substrate preferences and expression patterns, individual gene knockouts may not show distinct phenotypes This potential problem necessitates the use of model organisms (where the family size is smaller and genetic analysis more tractable) to aid in dissecting the role of this enzyme family in vivo. In vitro analysis of the cloned isoforms demonstrates biochemical activity and reveals functional conservation between certain Drosophila and mammalian orthologues

EXPERIMENTAL PROCEDURES
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DISCUSSION
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