Abstract

Computational modeling has contributed significantly to present understanding of cardiac electrophysiology including cardiac conduction, excitation-contraction coupling, and the effects and side-effects of drugs. However, the accuracy of in silico analysis of electrochemical wave dynamics in cardiac tissue is limited by the homogenization procedure (spatial averaging) intrinsic to standard continuum models of conduction. Averaged models cannot resolve the intricate dynamics in the vicinity of individual cardiomyocytes simply because the myocytes are not present in these models. Here we demonstrate how recently developed mathematical models based on representing every myocyte can significantly increase the accuracy, and thus the utility of modeling electrophysiological function and dysfunction in collections of coupled cardiomyocytes. The present gold standard of numerical simulation for cardiac electrophysiology is based on the bidomain model. In the bidomain model, the extracellular (E) space, the cell membrane (M) and the intracellular (I) space are all assumed to be present everywhere in the tissue. Consequently, it is impossible to study biophysical processes taking place close to individual myocytes. The bidomain model represents the tissue by averaging over several hundred myocytes and this inherently limits the accuracy of the model. In our alternative approach both E, M, and I are represented in the model which is therefore referred to as the EMI model. The EMI model approach allows for detailed analysis of the biophysical processes going on in functionally important spaces very close to individual myocytes, although at the cost of significantly increased CPU-requirements.

Highlights

  • In this brief Perspective we present our approach for cell-based modeling of the cardiac syncytium

  • Almost all tissue simulations of cardiac electrophysiology are based on models like the bidomain and monodomain models which entail spatial averaging and related limitations in spatial resolution

  • These simulations used to be performed using models where individual myocytes were coupled in cables and the electrical conduction was assumed to be one dimensional

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Summary

INTRODUCTION

In this brief Perspective we present our approach for cell-based modeling of the cardiac syncytium. We point out the limitations of the standard, averaged models, and illustrate how our approach can be used to reveal fundamental dynamics of a range of important, but incompletely understood mechanisms of arrhythmia. The main advantage of the cell-based approach is significantly increased accuracy, and the main disadvantage is significantly increased cost of the computations, and increased cost of the associated software development

A QUANTITATIVE UNDERSTANDING OF MOST ARRHYTHMIAS REMAINS ELUSIVE
THE LIMIT OF ACCURACY OF THE STANDARD MODELS OF CARDIAC ELECTROPHYSIOLOGY
CELL-BASED MODELS OF ELECTROPHYSIOLOGY
EMI REPRESENTS A GRAND CHALLENGE IN HIGH PERFORMANCE COMPUTING
STILL AVERAGING
DISCUSSION
Findings
DATA AVAILABILITY STATEMENT
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