Abstract

Atypical teratoid/rhabdoid tumors (AT/RT) are highly aggressive pediatric malignancies characterized by biallelic inactivation of the SMARCB1 tumor suppressor gene. We searched for novel genomic aberrations by investigating the copy number and expression alterations of let-7a3/let-7b microRNA (miRNA) and correlated these with expression of high-mobility group AT-hook 2 (HMGA2) oncoprotein, a target of let-7 miRNA family, in 18 AT/RT samples to elucidate potential roles of HMGA2 in the pathogenesis of AT/RT. Genomic aberrations, let-7a3/let-7b miRNA and HMGA2 expression in AT/RT tissues were identified using quantitative PCR, reverse transcription PCR (RT-PCR), and immunohistochemistry. The impact of let-7b miRNA on HMGA2 expression and the malignant potential of human rhabdoid tumor cell G401 (SMARCB1(-/-)) were investigated by antisense inhibition and ectopic overexpression studies. The copy number of let-7a3/let-7b miRNA was substantially decreased in 4 of 11 AT/RT samples. A significantly inverse correlation between let-7a3/let-7b miRNA expression and HMGA2 mRNA expression was observed in AT/RT tissues (R = -0.34; P < 0.05). Immunohistochemistry analysis demonstrated that HMGA2 was highly overexpressed in 83.3% (15 of 18) of AT/RT tissues. Restoration of let-7 miRNA or knockdown of HMGA2 expression significantly suppressed proliferation and colony formation, and almost abolished the invasive potential of G401 cells. Reduction of let-7a3/let-7b miRNA may be one of mechanisms leading to overexpression of HMGA2 in AT/RT tissues. HMGA2 oncoprotein plays critical roles in the pathogenesis of AT/RT development; and reconstitution of let-7 miRNA or knockdown of HMGA2 oncoprotein may provide a novel therapeutic strategy for the treatment of patients with AT/RT.

Highlights

  • Atypical teratoid/rhabdoid tumor (AT/RT) is a highly malignant neoplasm of the central nervous systemAuthors' Affiliations: 1Department of Molecular Pharmacology; 2Solexa Core Lab; 3Division of Information Sciences, Department of Molecular Medicine; 4Department of Pathology; 5Translational Research Laboratory, Beckman Research Institute, City of Hope National Medical Center, Duarte, California; 6Department of Pathology and Laboratory Medicine, Taipei Veterans General Hospital; 7Pediatric Neurosurgery, Department of Surgery, Cheng Hsin General Hospital; and 8Taipei Medical University, Taipei, TaiwanNote: Supplementary data for this article are available at Clinical Cancer Research Online.Ó2014 American Association for Cancer Research.(CNS) that preferentially manifests in children less than 3 years of age [1,2,3]

  • A significantly inverse correlation between let-7a3/let-7b miRNA expression and HMGA2 mRNA expression was observed in Atypical teratoid/rhabdoid tumors (AT/RT) tissues (R 1⁄4 À0.34; P < 0.05)

  • Reduction of let-7a3/let-7b miRNA may be one of mechanisms leading to overexpression of HMGA2 in AT/RT tissues

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Summary

Introduction

Loss of SMARCB1 function is conventionally considered as the primary cause responsible for the development of AT/ RT [2,3,4] These genetic alterations include homozygous deletions, heterozygous deletions, copy number neutral LOH, as well as mutations affecting all nine exons of SMARCB1 [2, 3, 5]. The SMARCB1 protein is a component of the switch/sucrose non-fermentable (SWI/SNF) chromatin remodeling complex that functions as a tumor suppressor. This complex positively regulates transcription of a particular set of eukaryotic genes, including c-Myc, involved in differentiation and apoptosis [7]

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