Abstract

Light-oxygen-voltage (LOV) domains function as blue light-inducible molecular switches. The photosensory LOV domains derived from plants and fungi have provided an indispensable tool for optogenetics. Here we develop a high-throughput screening system to efficiently improve switch-off kinetics of LOV domains. The present system is based on fluorescence imaging of thermal reversion of a flavin cofactor bound to LOV domains. We conducted multi site-directed random mutagenesis of seven amino acid residues surrounding the flavin cofactor of the second LOV domain derived from Avena sativa phototropin 1 (AsLOV2). The gene library was introduced into Escherichia coli cells. Then thermal reversion of AsLOV2 variants, respectively expressed in different bacterial colonies on agar plate, was imaged with a stereoscopic fluorescence microscope. Based on the mutagenesis and imaging-based screening, we isolated 12 different variants showing substantially faster thermal reversion kinetics than wild-type AsLOV2. Among them, AsLOV2-V416T exhibited thermal reversion with a time constant of 2.6 s, 21-fold faster than wild-type AsLOV2. With a slight modification of the present approach, we also have efficiently isolated 8 different decelerated variants, represented by AsLOV2-V416L that exhibited thermal reversion with a time constant of 4.3×103 s (78-fold slower than wild-type AsLOV2). The present approach based on fluorescence imaging of the thermal reversion of the flavin cofactor is generally applicable to a variety of blue light-inducible molecular switches and may provide a new opportunity for the development of molecular tools for emerging optogenetics.

Highlights

  • Blue light photoreceptors and photosensory domains derived from plants and fungi have been tested as light-inducible molecular switches or photoswitches to optogenetically control specific molecular processes in living cells, such as cellular signaling processes and gene expression (Fig. 1A) [1]

  • Fluorescence imaging of thermal reversion of AsLOV2 expressed in bacterial colonies AsLOV2 is a photosensory domain that binds with flavin mononucleotide (FMN) as a cofactor [18]

  • In the process of experimental design of the present multi site-directed mutagenesis of AsLOV2, we focused on Val416, Thr418, Asn425, Ile427, Ile466, Phe494 and Leu496

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Summary

Introduction

Blue light photoreceptors and photosensory domains derived from plants and fungi have been tested as light-inducible molecular switches or photoswitches to optogenetically control specific molecular processes in living cells, such as cellular signaling processes and gene expression (Fig. 1A) [1]. These natural photoswitches suffer from their slow switch-off kinetics [2,3,4,5,6] that prevents them from accurately controlling spatiotemporal activities of cellular proteins [7]. Thermally controlled reversion of the flavin cofactor in the dark condition requires minutes to hours depending on species of LOV domains [2,3,4,6,9], indicating that the thermal reversion is the rate-determining step for the photocycle (Fig. 1B, right to left)

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