Abstract

Biochemical studies of flavohemoglobin (Hmp) from Escherichia coli suggest that instead of aerobic oxygen delivery, a dioxygenase converts NO to NO3(-) and anaerobically, an NO reductase converts NO to N(2)O. To investigate the structural features underlying the chemical reactivity of Hmp, we have measured the resonance Raman spectra of the ligand-free ferric and ferrous protein and the CO derivatives of the ferrous protein. At neutral pH, the ferric protein has a five-coordinate high-spin heme, similar to peroxidases. In the ferrous protein, a strong iron-histidine stretching mode is present at 244 cm(-1). This frequency is much higher than that of any other globin discovered to date, although it is comparable to those of peroxidases, suggesting that the proximal histidine has imidazolate character. In the CO derivative, an open and a closed conformation were detected. The distal environment of the closed conformation is very polar, where the heme-bound CO strongly interacts with the B10 Tyr and/or the E7 Gln. These data demonstrate that the active site structure of Hmp is very similar to that of peroxidases and is tailored to perform oxygen chemistry.

Highlights

  • Hemoglobin genes have been discovered in organisms from virtually all biological kingdoms

  • The exact arrangement of these distal residues surrounding the ligand binding site in Hmp is not clear, it is plausible that the distal pocket is large and flexible (2, 21) based on the crystal structure of Alcaligenes (Ralstonia) Hb

  • The presence of a strong hydrogen bond between the proximal histidine and an aspartate leads to partially anionic character in the proximal histidine that supplies a better electronic push for the heterolytic cleavage of the O–O bond (48 –51)

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Summary

The abbreviations used are

E. coli flavohemoglobin; Hb, hemoglobin; Mb, myoglobin; CCP, cytochrome c peroxidase. Resonance Raman spectroscopy was employed to reveal the structural features of Hmp that underlie its chemical reactivity

EXPERIMENTAL PROCEDURES
RESULTS
A Globin with a Peroxidase-like Catalytic Site
DISCUSSION
Full Text
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