Abstract

BackgroundGenomic analysis has upended chordate phylogeny, placing the tunicates as the sister group to the vertebrates. This taxonomic rearrangement raises questions about the emergence of a tunicate/vertebrate ancestor.ResultsCharacterization of developmental genes uniquely shared by tunicates and vertebrates is one promising approach for deciphering developmental shifts underlying acquisition of novel, ancestral traits. The matrix glycoprotein Fibronectin (FN) has long been considered a vertebrate-specific gene, playing a major instructive role in vertebrate embryonic development. However, the recent computational prediction of an orthologous “vertebrate-like” Fn gene in the genome of a tunicate, Ciona savignyi, challenges this viewpoint suggesting that Fn may have arisen in the shared tunicate/vertebrate ancestor. Here we verify the presence of a tunicate Fn ortholog. Transgenic reporter analysis was used to characterize a Ciona Fn enhancer driving expression in the notochord. Targeted knockdown in the notochord lineage indicates that FN is required for proper convergent extension.ConclusionsThese findings suggest that acquisition of Fn was associated with altered notochord morphogenesis in the vertebrate/tunicate ancestor.Electronic supplementary materialThe online version of this article (doi:10.1186/s13227-016-0056-4) contains supplementary material, which is available to authorized users.

Highlights

  • Genomic analysis has upended chordate phylogeny, placing the tunicates as the sister group to the vertebrates

  • Maturation of Ciona mRNAs often involves trans-splicing of short RNA leader (SL) sequences resulting in diverse mRNAs with common 5′ end sequences [32]

  • We successfully amplified and cloned a ~4.0-kb fragment using total cDNA synthesized from Stage 13 C. intestinalis embryo RNA

Read more

Summary

Introduction

Genomic analysis has upended chordate phylogeny, placing the tunicates as the sister group to the vertebrates. Comparative genomic analysis has reversed this arrangement, placing the cephalochordates at the base of the chordates and the tunicates and vertebrates as sister groups [1, 2] This phylogenetic rearrangement raises a number of critical questions regarding chordate evolution. Recent studies have revealed rudimentary neural crest and placode lineages along the borders of the tunicate neural plate along with a set of cardiac/pharyngeal mesoderm progenitors orthologous to the vertebrate secondary heart field [13,14,15,16,17] These studies suggest that defining developmental features previously considered to have emerged in the vertebrate lineage first arose in the tunicate/vertebrate ancestor

Methods
Results
Discussion
Conclusion
Full Text
Published version (Free)

Talk to us

Join us for a 30 min session where you can share your feedback and ask us any queries you have

Schedule a call