Abstract

Alzheimer’s disease (AD) is progressive brain disorder that affects ~ 50 million people worldwide and has no current effective treatment. AD age of onset (ADAOO) has shown to be critical for the identification of genes that modify the appearance of AD signs and symptoms in a specific population. We clinically characterized and whole-exome genotyped 71 individuals with AD from the Paisa genetic isolate, segregating the (PSEN1) E280A dominant fully penetrant mutation, and analyzed the potential recessive effects of ~ 50,000 common functional genomic variants to the ADAOO. Standard quality control and filtering procedures were applied, and recessive single- and multi-locus linear mixed-effects models were used. We identified genetic variants in the SLC9C1, CSN1S1, and LOXL4 acting recessively to delay ADAOO up to ~ 11, ~ 6, and ~ 9 years on average, respectively. In contrast, the CC recessive genotype in marker DHRS4L2-rs2273946 accelerates ADAOO by ~ 8 years. This study, reports new recessive variants modifying ADAOO in PSEN1 E280A mutation carriers. This set of genes are implicated in important biological processes and molecular functions commonly affected by genes associated with the etiology of AD such as APP, APOE, and CLU. Future functional studies using modern techniques such as induced pluripotent stem cells will allow a better understanding of the over expression and down regulation of these recessive modifier variants and hence the pathogenesis of AD. These results are important for prediction of AD and ultimately, substantial to develop new therapeutic strategies for individuals at risk or affected by AD.

Highlights

  • The global incidence and prevalence of Alzheimer’s disease (AD) are increasing at alarming rates

  • We studied the association between common exonic functional variants (CEFVs) and AD age of onset (ADAOO) using single- and multi-locus recessive linear mixed-effect models (LMEMs) [30] with up to 10 steps in the backward/ forward optimization algorithm

  • Individuals included in this study exhibit an extreme phenotype, that is, suffer from AD caused by the Presenilin 1 (PSEN1) E280A fully penetrant mutation, belong to the Paisa genetic isolate and their AD age of onset (ADAOO) ranges from the early 30s to the late 70s [23]

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Summary

Introduction

The global incidence and prevalence of Alzheimer’s disease (AD) are increasing at alarming rates. Mastronardi and Mauricio Arcos-Burgos contributed to this work. Colombia 3 INPAC Research Group, Fundación Universitaria Sanitas, Bogotá, Colombia 4 Grupo de Investigación en Psiquiatría (GIPSI), Departamento de Psiquiatría, Instituto de Investigaciones Médicas (IIM), Facultad de Medicina, Universidad de Antioquia, Medellín, Colombia in 85 people worldwide will develop AD by 2050 [1]. The delay of the AD age of onset (ADAOO) by 1 year would result in ~ 9 million fewer cases of the disease worldwide by 2050 [2]. It is imperative to advance our efforts in therapeutic and preventative strategies, to cure, and to delay the ADAOO

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