Abstract

The fumarylacetoacetate hydrolase (FAH) protein superfamily of metabolic enzymes comprises a diverse set of enzymatic functions, including ß-diketone hydrolases, decarboxylases, and isomerases. Of note, the FAH superfamily includes many prokaryotic members with very distinct functions that lack homologs in eukaryotes. A prokaryotic member of the FAH superfamily, referred to as Cg1458, was shown to encode a soluble oxaloacetate decarboxylase (ODx). Based on sequence homologies to Cg1458, we recently identified human FAH domain containing protein-1 (FAHD1) as the first eukaryotic oxaloacetate decarboxylase. The physiological functions of ODx in eukaryotes remain unclear. Here we have probed the function of fahd-1, the nematode homolog of FAHD1, in the context of an intact organism. We found that mutation of fahd-1 resulted in reduced brood size, a deregulation of the egg laying process and a severe locomotion deficit, characterized by a reduced frequency of body bends, reduced exploratory movements and reduced performance in an endurance exercise test. Notably, mitochondrial function was altered in the fahd-1(tm5005) mutant strain, as shown by a reduction of mitochondrial membrane potential and a reduced oxygen consumption of fahd-1(tm5005) animals. Mitochondrial dysfunction was accompanied by lifespan extension in worms grown at elevated temperature; however, unlike in mutant worms with a defect in the electron transport chain, the mitochondrial unfolded protein response was not upregulated in worms upon inactivation of fahd-1. Together these data establish a role of fahd-1 to maintain mitochondrial function and consequently physical activity in nematodes.

Highlights

  • The fumarylacetoacetate hydrolase (FAH) protein superfamily branches out through all organisms, from prokaryotes to humans, comprising a diverse set of enzymatic functions

  • Whereas eukaryotic ODx enzymes were not identified so far, we recently found that human FAH domain containing protein 1 (FAHD1), a mitochondrial protein [4], displays ODx activity, establishing the first eukaryotic oxaloacetate decarboxylase [5]

  • Computational modeling revealed a structure of the catalytic center highly similar to human FAHD1 (Fig 1B)

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Summary

Introduction

The fumarylacetoacetate hydrolase (FAH) protein superfamily branches out through all organisms, from prokaryotes to humans, comprising a diverse set of enzymatic functions. The FAH fold is highly conserved, FAH superfamily members cover a wide range of diverse enzymatic activities, including hydrolases, isomerases, and decarboxylases. The FAH superfamily includes many prokaryotic members with very distinct functions that lack homologs in eukaryotes. This can be explained by the fact that these enzymes are part of highly specialized metabolic pathways, involving chemical compounds that higher organisms are unable to convert and utilize for their metabolism [1]. Whereas eukaryotic ODx enzymes were not identified so far, we recently found that human FAH domain containing protein 1 (FAHD1), a mitochondrial protein [4], displays ODx activity, establishing the first eukaryotic oxaloacetate decarboxylase [5]. We identified the nematode homolog of FAHD1, referred to as fahd-1, and assessed the consequences of its mutational inactivation in the nematode C. elegans, a lower eukaryotic model organism widely used for the analysis of metabolic regulation [6] and mitochondrial physiology [7]

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