Abstract

We show low-cost fabrication and characterization of borosilicate glass nanopores for single molecule sensing. Nanopores with diameters of ~100 nm were fabricated in borosilicate glass capillaries using laser assisted glass puller. We further achieve controlled reduction and nanometer-size control in pore diameter by sculpting them under constant electron beam exposure. We successfully fabricate pore diameters down to 6 nm. We next show electrical characterization and low-noise behavior of these borosilicate nanopores and compare their taper geometries. We show, for the first time, a comprehensive characterization of glass nanopore conductance across six-orders of magnitude (1M-1μM) of salt conditions, highlighting the role of buffer conditions. Finally, we demonstrate single molecule sensing capabilities of these devices with real-time translocation experiments of individual λ-DNA molecules. We observe distinct current blockage signatures of linear as well as folded DNA molecules as they undergo voltage-driven translocation through the glass nanopores. We find increased signal to noise for single molecule detection for higher trans-nanopore driving voltages. We propose these nanopores will expand the realm of applications for nanopore platform.

Highlights

  • Rapid and label-free detection of biomolecules has wide spread applications in biosensing as well as study of molecular conformations and complexes

  • The borosilicate capillaries used in this work are with outer diameter (OD) of 1mm and different inner diameters (ID) of 0.75 mm, 0.58 mm and 0.5 mm

  • In comparison with other solid-state nanopore fabrication methods that can make nanopore of sub-10nm diameter, we present borosilicate glass nanopores as one of the low cost alternative with table-top fabrication, ultra low noise and single molecule resolution

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Summary

Introduction

Rapid and label-free detection of biomolecules has wide spread applications in biosensing as well as study of molecular conformations and complexes. Resistive Pulse technique (RPT) has shown immense applicability for detection of biomolecules in their native conditions [1, 2]. This technique was invented in 1940s by W. In 1977 DeBlois and Bean further developed experimental and theoretical framework for viral particle translocation through submicron pores prepared by track etched method [4, 5]. Analyte biomolecules translocating through the nanopore, momentarily (Δt) obstruct pore current by displacing ions from the pore and is measured as change in pore conductance (ΔG).

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