Abstract

The high use of antibiotics for the treatment of bacterial diseases is one of the main problems in the mass production of animal protein. Salmon farming in Chile is a clear example of the above statement, where more than 5,500 tonnes of antibiotics have been used over the last 10 years. This has caused a great impact both at the production level and on the environment; however, there are still few works in relation to it. In order to demonstrate the impact of the high use of antibiotics on fish gut microbiota, we have selected four salmon farms presenting a similar amount of fish of the Atlantic salmon species (Salmo salar), ranging from 4,500 to 6,000 tonnes. All of these farms used treatments with high doses of antibiotics. Thus, 15 healthy fish were selected and euthanised in order to isolate the bacteria resistant to the antibiotics oxytetracycline and florfenicol from the gut microbiota. In total, 47 bacterial isolates resistant to florfenicol and 44 resistant to oxytetracycline were isolated, among which isolates with Minimum Inhibitory Concentrations (MIC) exceeding 2048 μg/mL for florfenicol and 1024 μg/mL for oxytetracycline were found. In addition, another six different antibiotics were tested in order to demonstrate the multiresistance phenomenon. In this regard, six isolates of 91 showed elevated resistance values for the eight tested antibiotics, including florfenicol and oxytetracycline, were found. These bacteria were called “super-resistant” bacteria. This phenotypic resistance was verified at a genotypic level since most isolates showed antibiotic resistance genes (ARGs) to florfenicol and oxytetracycline. Specifically, 77% of antibiotic resistant bacteria showed at least one gene resistant to florfenicol and 89% showed at least one gene resistant to oxytetracycline. In the present study, it was demonstrated that the high use of the antibiotics florfenicol and oxytetracycline has, as a consequence, the selection of multiresistant bacteria in the gut microbiota of farmed fish of the Salmo salar species at the seawater stage. Also, the phenotypic resistance of these bacteria can be correlated with the presence of antibiotic resistance genes.

Highlights

  • The phenomenon of antibiotic resistance is, according to the General Assembly of the United Nations, a priority topic for human development, being on par with global warming [1]

  • More than 12,000 colonies were obtained in the tryptic soy agar plates (TSA) plates without antibiotics from the four farms sampled

  • Taxonomic differences among bacteria resistant to florfenicol and oxytetracycline In contrast to previously published reports, the present study simultaneously provides information related to the phenomena of resistance to florfenicol and oxytetracycline, with the different tested isolates having been directly obtained from the intestinal microbiota of farmed salmon exposed to high concentrations of antibiotics

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Summary

Introduction

The phenomenon of antibiotic resistance is, according to the General Assembly of the United Nations, a priority topic for human development, being on par with global warming [1]. Antibiotics are not limited to medical applications in humans; notable quantities are used in farm animals and agricultural crops [3,4] The aims of such usage are to prevent or cure infectious diseases, as well as to promote livestock/crop growth [5]. The issue of antibiotic resistance is further aggravated by climate change, which has accelerated the global food crisis. Antibiotics are routinely administered in aquaculture farms to treat a range of diseases [8] Antibiotic usage in this industry is largely uncontrolled, and measures must be enacted to prevent consequent harm to human health and the environment [9]

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