Abstract

A growing number of bacteria and fungi have been found to promote plant growth through mutualistic interactions involving elements such as volatile organic compounds (VOCs). Here, we report the identification of an environmentally isolated strain of Cladosporium sphaerospermum (herein named TC09), that substantially enhances plant growth after exposure in vitro beyond what has previously been reported. When cultured on Murashige and Skoog (MS) medium under in vitro conditions, tobacco seedlings (Nicotiana tabacum) exposed to TC09 cultures for 20 days increased stem height and whole plant biomass up to 25- and 15-fold, respectively, over controls without exposure. TC09-mediated growth promotion required >5 g/L sucrose in the plant culture medium and was influenced by the duration of exposure ranging from one to 10 days, beyond which no differences were detected. When transplanted to soil under greenhouse conditions, TC09-exposed tobacco plants retained higher rates of growth. Comparative transcriptome analyses using tobacco seedlings exposed to TC09 for 10 days uncovered differentially expressed genes (DEGs) associated with diverse biological processes including cell expansion and cell cycle, photosynthesis, phytohormone homeostasis and defense responses. To test the potential efficacy of TC09-mediated growth promotion on agricultural productivity, pepper plants (Capsicum annuum L.) of two different varieties, Cayenne and Minisweet, were pre-exposed to TC09 and planted in the greenhouse to monitor growth, flowering, and fruit production. Results showed that treated pepper plants flowered 20 days earlier and yielded up to 213% more fruit than untreated controls. Altogether the data suggest that exposure of young plants to C. sphaerospermum produced VOCs may provide a useful tool to improve crop productivity.

Highlights

  • Innumerable bacterial and fungal microorganisms colonize various habitats and can influence the survival of plants

  • The internal transcribed spacer 1 (ITS1) and ITS2 regions associated with the 5.8S ribosomal RNA gene in fungal organisms were targeted for species identification

  • Phylogenetic analysis of 148 sequences homologous to the ITS3/4 amplicon that were available in GenBank showed that TC09 clusters with known isolates of C. sphaerospermum (Supplementary Figure S1)

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Summary

Introduction

Innumerable bacterial and fungal microorganisms colonize various habitats and can influence the survival of plants. Beneficial microorganisms are categorized into a number of groups depending on their habitats and functional roles They include organic matter decomposers, nitrogen fixing bacteria, mycorrhizal fungi, detoxifiers, mutualistic endophytes, and pathogen-antagonists (Barea et al, 2005). These microbes produce and release unique proteins, enzymes, antibiotics, phenolics, lipids, carbohydrates, and phytohormones improving the availability of essential nutrients and plant growth. These products have the potential to encourage environmentally friendly and sustainable cultivation practices and protect biodiversity (Thakore, 2006; Berg, 2009; Baez-Rogelio et al, 2016)

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