Abstract

Nitrogen (N) is one of the indispensable factors in rice growth and development. China holds a premier position in the production of rice and at the same time also faces higher N fertilizer costs along with serious damage to the environment. A better solution is much needed to address these issues, without disrupting the production of rice as an important cereal, while minimizing all the deleterious effects on the environment. Two isogenic lines Kitaake (WT) and its genetically modified line CIPK2 (RC), overexpressing the gene for Calcineurin B-like interacting protein kinase 2 (OsCIPK2) with better nitrogen use efficiency (NUE), were compared for their growth and development under low versus normal levels of N. NUE is a complex trait mainly related to a plant’s efficiency in extraction, assimilation, and recycling of N from soil. The microbial population was analyzed using high-throughput Illumina Miseq 16S rRNA sequencing and found that RC with CIPK2, specifically expressed in rice root, not only performed better without nitrogen fertilizer (LN) but also increased the diversity of bacterial communities in rice rhizosphere compartments (rhizosphere, rhizoplane, and endosphere). The relative abundance of beneficial bacteria phyla increased, which are known to promote the circulation and transformation of N in rhizosphere soil. To further explore the potential of RC regarding better performance under LN, the ion fluxes in root apical were detected by non-invasive micro-test technique (NMT). We found that RC can absorb more Ca2+ and NO3− under LN as compared to WT. Finally, compared to WT, RC plants exhibited better growth of root and shoot, and increased yield and N uptake under LN, whereas there was no significant difference in the growth of two rice lines under normal nitrogen (NN) treatment. We are able to get preliminary results, dealing with the OsCIPK2 overexpressed rice line, by studying the rice molecular, physiological, and chemical parameters related to NUE. The results laid the foundation for further research on N absorption and utilization in rice from the soil and the interaction with microbial communities.

Highlights

  • Rice is one of the most important and major staple foods in the world

  • The results showed that the activities of urease, invertase, and nitrate reductase in rhizosphere soil of RC were significantly higher than the WT (Table 5)

  • The results showed that the enhanced expression of CIPK2 in roots promoted the uptake of NO3− by roots under LN conditions, which was consistent with the enhanced nitrification in the rhizosphere of RC

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Summary

Introduction

Rice is one of the most important and major staple foods in the world. The improvement of rice yield has always been a topic of concern and great interest around the world. With a continuously expanding world population, issues such as the shortage of water resources and the lack of arable land are becoming devastatingly serious. There is urgency to improve production by applying sustainable measures. The most preferred technical measure to increase yield per unit area mainly depends on the application of fertilizers, especially nitrogenous ones [1,2]. Excessive N application rate and low NUE increase the production cost of rice, and bring a series of environmental problems [3]. It is important to improve the nitrogen utilization efficiency (NUE) of rice and reduce the use of N fertilizers

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