Abstract

HIV-1 infection causes AIDS, infecting millions worldwide. The virus can persist in a state of chronic infection due to its ability to become latent. We have previously shown a link between HIV-1 infection and exosome production. Specifically, we have reported that exosomes transport viral proteins and RNA from infected cells to neighboring uninfected cells. These viral products could then elicit an innate immune response, leading to activation of the Toll-like receptor and NF-κB pathways. In this study, we asked whether exosomes from uninfected cells could activate latent HIV-1 in infected cells. We observed that irrespective of combination antiretroviral therapy, both short- and long-length viral transcripts were increased in wild-type HIV-1-infected cells exposed to purified exosomes from uninfected cells. A search for a possible mechanism for this finding revealed that the exosomes increase RNA polymerase II loading onto the HIV-1 promoter in the infected cells. These viral transcripts, which include trans-activation response (TAR) RNA and a novel RNA that we termed TAR-gag, can then be packaged into exosomes and potentially be exported to neighboring uninfected cells, leading to increased cellular activation. To better decipher the exosome release pathways involved, we used siRNA to suppress expression of ESCRT (endosomal sorting complex required for transport) proteins and found that ESCRT II and IV significantly control exosome release. Collectively, these results imply that exosomes from uninfected cells activate latent HIV-1 in infected cells and that true transcriptional latency may not be possible in vivo, especially in the presence of combination antiretroviral therapy.

Highlights

  • HIV-1 infection causes AIDS, infecting millions worldwide

  • The effect of exosomes derived from HIV-1–infected cells on uninfected recipient cells showed an inhibition of the PKR/eIF2␣ pathway as well as activation of the Toll-like receptors by trans-activation response (TAR) RNA leading to activation of the NF-␬B pathway [30, 44]

  • Our rationale was that HIV-1–latently infected cells may still allow either short or long transcripts to be made in the presence of stimulatory molecules present in exosomes, which could partly explain a leaky HIV-1 transcriptional machinery or stochastic fluctuations in gene expression in infected cells

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Summary

Introduction

HIV-1 infection causes AIDS, infecting millions worldwide. The virus can persist in a state of chronic infection due to its ability to become latent. At least six mechanisms of HIV-1 latency have previously been observed: (i) the sequestration of host transcription factors, such as NF-␬B, in the cytoplasm [3]; (ii) epigenetic silencing, where nucleosomes 0 and 1 show histone modification that inhibits transcription through SWI/SNF (4 –7); (iii) transcriptional interference, which occurs when one transcription factor inhibits another and can result in premature termination of RNA polymerase II [4]; (iv) sequestration of p-TEFb and limiting amounts of cyclin T1 [2, 8]; (v) antagonism between host protein BRD4 and viral Tat protein on p-TEFb [2]; and (vi) use of viral non-coding RNA to bring about transcriptional silencing [3, 9, 10] Because of these mechanisms, HIV-1 can remain within the host immune system, causing a persistent reservoir and preventing clearance of the infection by the host [11]. Another group is histone methyltransferase inhibitors, such as cyproheptadine [14], which prevent methylation of histones

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