Abstract

Biotic stresses do damage to the growth and development of plants, and yield losses for some crops. Confronted with microbial infections, plants have evolved multiple defense mechanisms, which play important roles in the never-ending molecular arms race of plant–pathogen interactions. The complicated defense systems include pathogen-associated molecular patterns (PAMP) triggered immunity (PTI), effector triggered immunity (ETI), and the exosome-mediated cross-kingdom RNA interference (CKRI) system. Furthermore, plants have evolved a classical regulation system mediated by miRNAs to regulate these defense genes. Most of the genes/small RNAs or their regulators that involve in the defense pathways can have very rapid evolutionary rates in the longitudinal and horizontal co-evolution with pathogens. According to these internal defense mechanisms, some strategies such as molecular switch for the disease resistance genes, host-induced gene silencing (HIGS), and the new generation of RNA-based fungicides, have been developed to control multiple plant diseases. These broadly applicable new strategies by transgene or spraying ds/sRNA may lead to reduced application of pesticides and improved crop yield.

Highlights

  • The arms race of plants and host-pathogens seems never to stop, and sometimes the race is very intense

  • The prevalent defense mechanisms are categorized into three defense layers: the preliminary defense, pathogen-associated molecular pattern (PAMP) triggered immunity (PTI) [1], the secondary defense, effector-triggered immunity (ETI) [2], and the additional defense, the exosome-mediated cross-kingdom RNA interference (CKRI) system [3]

  • Using the cell surface-localized pattern recognition receptors (PRR), plants can detect the infection of invaders by recognizing the conserved microbe-associated or pathogen-associated molecular patterns (MAMPs or PAMPs) [1]

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Summary

Introduction

The arms race of plants and host-pathogens seems never to stop, and sometimes the race is very intense. The prevalent defense mechanisms are categorized into three defense layers: the preliminary defense, pathogen-associated molecular pattern (PAMP) triggered immunity (PTI) [1], the secondary defense, effector-triggered immunity (ETI) [2], and the additional defense, the exosome-mediated cross-kingdom RNA interference (CKRI) system [3]. It is well-known that PTI functions in basal defense. We mainly summarize the current knowledge of the defense genes and their evolution paths regulated by miRNAs in plants, and discuss their potential applications in crop improvements in the last section

The First Layer of Defense
The Third Layer of Defense
The First Layer of Defense Regulation: miRNAs Involved in the PTI Pathway
The Second Layer of Defense Regulation
The Evolution of Defense Gene in PTI
The Evolution of Defense Gene in ETI
The Evolution of miRNAs in PTI
The Evolution of miRNAs in ETI
The First Strategy
The Second Strategy
The Third Strategy
Findings
Conclusions
Full Text
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