Evidence for conformational changes in elongation factor Tu induced by GTP and GDP

Abstract

A comparative study of the rates of tritium-hydrogen exchange in three liganded states of the protein elongation factor Tu (EFTu) reveals a substantial conformational difference between the free (EFTu) or GTP-bound (EFTu·GTP) forms and when GDP is present (EFTu·GDP). This conformational difference is acentuated with short time tritiations. There are 25–35% more very slow hydrogens in EFTu·GDP than in EFTu·GTP, indicating that GDP induces a tighter conformation in EFTu than does GTP . Thus, a rationale is provided for the difference in reactivity of EFTu·GTP and EFTu·GDP for AA-tRNA and a conformational role in regulating protein biosynthesis may be proposed for GTP and GDP. Finally, we demonstrate that nucleoside polyphosphates may cause size-able conformational changes in proteins.