Abstract

BackgroundSeptic shock is the most severe complication of sepsis, and is a major cause of childhood mortality, constituting a heavy public health burden.MethodsWe analyzed the gene expression profiles of septic shock and control samples from the Gene Expression Omnibus (GEO). Four differentially expressed genes (DEGs) from survivor and control groups, non-survivor and control groups, and survivor and non-survivor groups were selected. We used data about these genes to establish a logistic regression model for predicting the survival of septic shock patients.ResultsLeave-one-out cross validation and receiver operating characteristic (ROC) analysis indicated that this model had good accuracy. Differential expression and Gene Set Enrichment Analysis (GSEA) between septic shock patients stratified by prediction score indicated that the systemic lupus erythematosus pathway was activated, while the limonene and pinene degradation pathways were inactivated in the high score group.ConclusionsOur study provides a novel approach for the prediction of the severity of pathology in septic shock patients, which are significant for personalized treatment as well as prognostic assessment.

Highlights

  • Sepsis is an acute organ dysfunction that is secondary to infection [1]

  • Septic shock is characterized by hemodynamic alterations including hypovolemia, decrease in vascular tone, and myocardial depression associated with organ dysfunction [6]

  • Study population The gene expression profiles of 130 whole blood samples were obtained from Gene Expression Omnibus (GEO), including 98 children with septic shock and 32 controls with age from 0 to 10.9 and median age of 2

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Summary

Introduction

Sepsis is an acute organ dysfunction that is secondary to infection [1]. It is a major cause of death in patients with complex conditions including humoral and cellular reactions, inflammatory and anti-inflammatory issues, and circulatory problems [2,3,4]. The most severe complication of sepsis, septic shock, has a mortality of 20–35% [5]. Several prognostic factors for sepsis and septic shock have been investigated. Septic shock is the most severe complication of sepsis, and is a major cause of childhood mortality, constituting a heavy public health burden

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