Abstract

E-cadherin (CDH1) is a glycoprotein that mediates adhesion between epithelial cells and also suppresses cancer invasion. Mutation or deletion of the CDH1 gene has been reported in 30–60% cases of invasive lobular carcinoma (ILC). However, little is known about genomic differences between ILC with and without a CDH1 alteration. Therefore, we analyzed whole genome sequencing data of 169 ILC cases from The Cancer Genome Atlas (TCGA) to address this deficiency. Our study shows that CDH1 gene was altered in 59.2% (100/169) of ILC. No significant difference was identified between CDH1-altered and -unaltered ILC cases for any of the examined demographic, clinical or pathologic characteristics, including histologic grade, tumor stage, lymph node metastases, or ER/PR/HER2 states. Seven recurrent mutations (PTEN, MUC16, ERBB2, FAT4, PCDHGA2, HERC1 and FLNC) and four chromosomal changes with recurrent copy number variation (CNV) (11q13, 17q12-21, 8p11 and 8q11) were found in ILC, which correlated with a positive or negative CDH1 alteration status, respectively. The prevalence of the most common breast cancer driver abnormalities including TP53 and PIK3CA mutations and MYC and ERBB2 amplifications showed no difference between the two groups. However, CDH1-altered ILC with an ERBB2 mutation shows a significantly worse prognosis compared to its counterparts without such a mutation. Our study suggests that CDH1-altered ILC patients with ERBB2 mutations may represent an actionable group of patients who could benefit from targeted breast cancer therapy.

Highlights

  • The most recent WHO Classification of Tumors of the Breast (2012) has described over 20 special types of invasive breast cancer [1]

  • While most invasive lobular carcinoma (ILC) belongs to so-called classic variant consisting of small, monotonous and non-cohesive tumor cells individually dispersed or arranged in a single-file linear pattern, multiple ILC histologic variants have been described, including solid, alveolar, and trabecular variants based on their architectural patterns, or pleomorphic, apocrine, histiocytoid, and signet ring cell variants based on their cytology [2, 3]

  • We have further demonstrated that ILC with and without CDH1 alterations are strikingly similar clinically, pathologically, and even genetically

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Summary

Introduction

The most recent WHO Classification of Tumors of the Breast (2012) has described over 20 special types of invasive breast cancer [1]. ILC is a histologic diagnosis, and by definition, it composes of non-cohesive tumor cells individually dispersed or arranged in a single-file linear pattern in a fibrous stroma [1]. While most ILC belongs to so-called classic variant consisting of small, monotonous and non-cohesive tumor cells individually dispersed or arranged in a single-file linear pattern, multiple ILC histologic variants have been described, including solid, alveolar, and trabecular variants based on their architectural patterns, or pleomorphic, apocrine, histiocytoid, and signet ring cell variants based on their cytology [2, 3]. The accumulating outcome data on different ILC variants are sometimes conflicting, there has been a recent consensus that the histologic grading features including nuclear pleomorphism and mitotic count are probably the most useful independent prognostic factors [1, 2, 4]

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