Abstract

Recent discoveries of broadly neutralizing antibodies (bnAbs) in HIV-1-infected individuals have led to the identification of several major "vulnerable sites" on the HIV-1 envelope (Env) glycoprotein. These sites have provided precise targets for HIV-1 vaccine development, but identifying and utilizing many of these targets remain technically challenging. Using a yeast surface display-based approach, we sought to identify epitope-focused antigenic domains (EADs) containing one of the "vulnerable sites," the CD4-binding site (CD4bs), through screening and selection of a combinatorial antigen library of the HIV-1 envelope glycoprotein with the CD4bs bnAb VRC01. We isolated multiple EADs and found that their trimeric forms have biochemical and structural features that preferentially bind and activate B cells that express VRC01 in vitro More importantly, these EADs could induce detectable levels of neutralizing antibodies against genetically related autologous and heterologous subtype B viruses in guinea pigs. Our results demonstrate that an epitope-focused approach involving a screen of a combinatorial antigen library is feasible. The EADs identified here represent a promising collection of possible targets in the rational design of HIV-1 vaccines and lay the foundation for harnessing the specific antigenicity of CD4bs for protective immunogenicity in vivo.

Highlights

  • Recent discoveries of broadly neutralizing antibodies in HIV-1–infected individuals have led to the identification of several major “vulnerable sites” on the HIV-1 envelope (Env) glycoprotein

  • The epitopefocused antigenic domains (EADs) identified here represent a promising collection of possible targets in the rational design of HIV-1 vaccines and lay the foundation for harnessing the specific antigenicity of CD4-binding site (CD4bs) for protective immunogenicity in vivo

  • As many of the epitopes are conformational in nature, carving them out from the entire envelope glycoprotein while maintaining and stabilizing their native structures remains a technical challenge

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Summary

To whom correspondence should be addressed

Immune responses are believed to play critical roles in combating infection, it has been widely theorized that a successful vaccine should elicit a potent, sustainable neutralizing antibody response against a broad range of circulating HIV-1 strains [1, 2]. Recent scientific advances have led to the identification of a growing number of broadly neutralizing antibodies (bnAbs) against HIV-1, which in turn have provided critical insights into the protective mechanisms of the human immune system and precise targets for immunogen design [3, 4] Speaking, these bnAbs recognized five major “vulnerable sites” on the HIV-1 envelope glycoprotein gp160 as follows: 1) the CD4binding site (CD4bs); 2) the glycan-associated V1V2; 3) V3 subdomains of gp120; 4) the membrane proximal external region (MPER) of gp; and 5) the interface between gp120 and gp41 [5,6,7]. The EAD-VRC01 identified here could serve as a promising prototype for the future HIV-1 vaccines aiming to translate the specific antigenicity of CD4bs into the protective immunogenicity in vivo

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