Abstract

BackgroundFetal hemoglobin (HbF) induction has shown promise for the treatment of β-hemoglobinopathies. HbF induction in β-thalassemia could overcome ineffective hematopoiesis and thus terminate transfusion dependency for formerly transfusion dependant patients. Several miRNAs have been found to reactivate γ-globin expression and increase HbF. In this study, we aimed to investigate the expression of 4 miRNAs (miR-15a, miR-16-1, miR-96, and miR-486-3p) in high HbF thalassemia patients and correlate their levels with the patients’ HbF levels then, in order to predict the exact role of the studied miRNAs in hematopoiesis, a bioinformatic analysis was carried out. We went through this bioinformatic analysis to determine the network of genes regulated by miRNAs and further investigate the interaction between all of them through their involvement in hematopoiesis. In this study, the differential expression was measured by qRT-PCR for 40 patients with high HbF and compared to 20 healthy controls. Bioinformatics was conducted involving functional annotation and pathway enrichment analyses. ResultsThe studied microRNAs were significantly deregulated in thalassemia patients in correlation with HbF. Functional annotation and pathway enrichment analyses revealed a major role of miR-486-3p and miR-15a in HbF induction. ConclusionMiR-486-3p and miR-15a are crucial for HbF induction. Further validating studies are needed.

Highlights

  • Fetal hemoglobin (HbF) induction has shown promise for the treatment of β-hemoglobinopathies

  • HbF Egyptian thalassemia patients were found to be differentially expressed compared to controls and could predicted that had a potential role on hematopoiesis and hemoglobin switching processes

  • Relative expression levels of target microRNAs in patients vs. controls Our study revealed that the Egyptian thalassemia patients had concordant miR-96 profile with the previous records in other populations, such that miR-96 expression in high HbF cases was about 10-fold lower than controls

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Summary

Introduction

Fetal hemoglobin (HbF) induction has shown promise for the treatment of β-hemoglobinopathies. We aimed to investigate the expression of 4 miRNAs (miR-15a, miR-16-1, miR-96, and miR-486-3p) in high HbF thalassemia patients and correlate their levels with the patients’ HbF levels in order to predict the exact role of the studied miRNAs in hematopoiesis, a bioinformatic analysis was carried out. We went through this bioinformatic analysis to determine the network of genes regulated by miRNAs and further investigate the interaction between all of them through their involvement in hematopoiesis. There is an urging demand for new safe and effective alternatives

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