Abstract

Porcine reproductive and respiratory syndrome (PRRS) is endemic in most pork producing countries. In Chile, eradication of PRRS virus (PRRSV) was successfully achieved in 2009 as a result of the combined efforts of producers and the animal health authorities. In October 2013, after several years without detecting PRRSV under surveillance activities, suspected cases were confirmed on a commercial swine farm. Here, we describe the PRRS epidemic in Chile between October 2013 and April 2015, and we studied the origins and spread of PRRSV throughout the country using official surveillance data and Bayesian phylogenetic analysis. Our results indicate that the outbreaks were caused by a PRRSV closely related to viruses present in swine farms in North America, and different from the strain that circulated in the country before 2009. Using divergence time estimation analysis, we found that the 2013–2015 PRRSV may have been circulating in Chile for at least one month before the first detection. A single strain of PRRSV spread into a limited number of commercial and backyard swine farms. New infections in commercial systems have not been reported since October 2014, and eradication is underway by clearing the disease from the few commercial and backyard farms that remain positive. This is one of the few documented experiences of PRRSV introduction into a disease-free country.

Highlights

  • Porcine reproductive and respiratory syndrome (PRRS) is one of the most important viral diseases affecting domestic pigs

  • Between October of 2013 and April of 2015, 45 commercial and 17 backyard farms were confirmed as PRRS virus (PRRSV) positive

  • PRRSV infections in backyard pig farms were reported during the epidemic

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Summary

Introduction

Porcine reproductive and respiratory syndrome (PRRS) is one of the most important viral diseases affecting domestic pigs. Clinical presentation of PRRS includes abortion, premature farrowing, stillbirths, and increased pre-weaning mortality. In growing pigs, it causes respiratory disease with decreased weight gain and increased mortality [1]. PRRS is caused by two different viral species; PRRS virus (PRRSV) 1 and PRRSV 2, which were previously referred to as the European and the American PRRSV genotypes respectively. There is broad genetic diversity within PRRSVs, which have been further grouped into 9 lineages (PRRSV 2) and 4 subtypes (PRRSV 1) based upon ORF5 phylogenetic relationships [3,4]. PRRSV 2 lineages have ~10% nucleotide differences in ORF5. Most identified and sequenced viruses of PRRSV 2 (>85%) belong to lineages 1, 5, 8 and 9 [3]

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