Abstract
ObjectiveWe investigated whether previously reported single nucleotide polymorphisms (SNPs) of EPHA2 in European studies are associated with cataract in India.MethodsWe carried out a population-based genetic association study. We enumerated randomly sampled villages in two areas of north and south India to identify people aged 40 and over. Participants attended a clinical examination including lens photography and provided a blood sample for genotyping. Lens images were graded by the Lens Opacification Classification System (LOCS III). Cataract was defined as a LOCS III grade of nuclear ≥4, cortical ≥3, posterior sub-capsular (PSC) ≥2, or dense opacities or aphakia/pseudophakia in either eye. We genotyped SNPs rs3754334, rs7543472 and rs11260867 on genomic DNA extracted from peripheral blood leukocytes using TaqMan assays in an ABI 7900 real-time PCR. We used logistic regression with robust standard errors to examine the association between cataract and the EPHA2 SNPs, adjusting for age, sex and location.Results7418 participants had data on at least one of the SNPs investigated. Genotype frequencies of controls were in Hardy-Weinberg Equilibrium (p>0.05). There was no association of rs3754334 with cataract or type of cataract. Minor allele homozygous genotypes of rs7543472 and rs11260867 compared to the major homozygote genotype were associated with cortical cataract, Odds ratio (OR) = 1.8, 95% Confidence Interval (CI) (1.1, 3.1) p = 0.03 and 2.9 (1.2, 7.1) p = 0.01 respectively, and with PSC cataract, OR = 1.5 (1.1, 2.2) p = 0.02 and 1.8 (0.9, 3.6) p = 0.07 respectively. There was no consistent association of SNPs with nuclear cataract or a combined variable of any type of cataract including operated cataract.ConclusionsOur results in the Indian population agree with previous studies of the association of EPHA2 variants with cortical cataracts. We report new findings for the association with PSC which is particularly prevalent in Indians.
Highlights
Age-related cataract results from increasing opacification of the ocular lens eventually leading to visual loss and is a problem found in many people throughout the world as they age
Earlier studies found that family history was a risk factor for cataract [3,4,5,6] while the strongest evidence came from twin studies demonstrating a heritability of 48% for nuclear cataract [7] and 59% for cortical cataract [8]
Most work on cataract genetics has focused on inherited congenital cataract and there has been limited success in identifying common genetic variants associated with age-related cataract
Summary
Age-related cataract results from increasing opacification of the ocular lens eventually leading to visual loss and is a problem found in many people throughout the world as they age. In low income countries with poor access to cataract surgery, cataract is the main cause of vision impairment and blindness [1]. In well-resourced countries cataract surgery is one of the highest health care expenditures [2]. There is evidence of a genetic component to age-related cataract. Most work on cataract genetics has focused on inherited congenital cataract and there has been limited success in identifying common genetic variants associated with age-related cataract. Some genetic variants in populations of European descent have been found to be associated with cataract, primarily cortical cataract [9,10,11,12]
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