Abstract

In recent years, deep learning has taken the spotlight in automated medical bioimaging. However, the performance of current state-of-the-art score stems primarily from well-tuned parameters and architecture. There is still only limited research focused on dynamic data augmentation, even in the fields of machine learning and computer vision. In this study, we propose a dynamic training and testing augmentation capable of increasing performance significantly. The searching augmentation framework used in this study requires fewer GPU hours than a conventional search algorithm, which needs to train a new model every time augmentation is proposed. Speeding up of the search algorithm is achieved by using Bayesian optimization on a trained model, so we do not have to train a new model every time a new augmentation policy is proposed. The performance of our method is compared with that of a single model and the ensemble model that happens to be the winner of the ISIC 2019 challenge. Furthermore, we use the latest compact yet significantly accurate network architecture EfficientNet as the backbone system. Our method delivers a superior result, and this study also shares the searched augmentation policy utilized, which requires extraordinary resources. Thus, other researchers can use the searched augmentation policies for dermoscopic images to improve performance.

Highlights

  • Skin cancer diagnosis has increased significantly over the last decade: 54% from 2009 to 2019 [1]

  • That we explore the application of the probabilistic augmentation framework to images in the medical-domain, to dermoscopic images, to diagnose skin cancer types

  • We proved the performance of dynamic augmentation and dynamic preprocessing on inference (DPI) outperform the current state-of-the-art ensemble model for skin diagnosis

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Summary

Introduction

Skin cancer diagnosis has increased significantly over the last decade: 54% from 2009 to 2019 [1]. Skin cancer is an abnormal condition in which skin cells multiply rapidly due to DNA mutation or genetic defects. This abnormality is predominantly caused by protracted exposure to ultraviolet radiation from the sun [2]. Dermatologists diagnose skin cancer via physical examination and biopsies. The skin samples taken from the suspected spot during the biopsy are sent to a laboratory for examination. About 10,000 people in the United States are diagnosed with skin cancer everyday [1]. The traditional process is time consuming, and the survival rate for early-detected skin cancer is about 98%

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