Abstract

BackgroundWhile Saccharomyces cerevisiae is a promising host for cost-effective biorefinary processes due to its tolerance to various stresses during fermentation, the metabolically engineered S. cerevisiae strains exhibited rather limited production of higher alcohols than that of Escherichia coli. Since the structure of the central metabolism of S. cerevisiae is distinct from that of E. coli, there might be a problem in the structure of the central metabolism of S. cerevisiae. In this study, the potential production of higher alcohols by S. cerevisiae is compared to that of E. coli by employing metabolic simulation techniques. Based on the simulation results, novel metabolic engineering strategies for improving higher alcohol production by S. cerevisiae were investigated by in silico modifications of the metabolic models of S. cerevisiae.ResultsThe metabolic simulations confirmed that the high production of butanols and propanols by the metabolically engineered E. coli strains is derived from the flexible behavior of their central metabolism. Reducing this flexibility by gene deletion is an effective strategy to restrict the metabolic states for producing target alcohols. In contrast, the lower yield using S. cerevisiae originates from the structurally limited flexibility of its central metabolism in which gene deletions severely reduced cell growth.ConclusionsThe metabolic simulation demonstrated that the poor productivity of S. cerevisiae was improved by the introduction of E. coli genes to compensate the structural difference. This suggested that gene supplementation is a promising strategy for the metabolic engineering of S. cerevisiae to produce higher alcohols which should be the next challenge for the synthetic bioengineering of S. cerevisiae for the efficient production of higher alcohols.

Highlights

  • While Saccharomyces cerevisiae is a promising host for cost-effective biorefinary processes due to its tolerance to various stresses during fermentation, the metabolically engineered S. cerevisiae strains exhibited rather limited production of higher alcohols than that of Escherichia coli

  • If the stylized analysis performed in this study bears any resemblance to the real metabolism of E. coli and S. cerevisiae, the implications of this study for metabolic engineering of S. cerevisiae are radical

  • Due to its limited flexibility, the central metabolism of S. cerevisiae could not reach the flux distributions required for the effective production of higher alcohols

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Summary

Introduction

While Saccharomyces cerevisiae is a promising host for cost-effective biorefinary processes due to its tolerance to various stresses during fermentation, the metabolically engineered S. cerevisiae strains exhibited rather limited production of higher alcohols than that of Escherichia coli. One technical reason for the low yield is the reduced activity of the introduced enzymes due to the ectopic expression of the bacterial genes Another possible reason is that there might be a problem in the structure of the central metabolism of S. cerevisiae. Because the range of possible distributions of metabolic fluxes is restricted by the structure of the central metabolic network, S. cerevisiae may not be able to supply the required amount of the precursor and the reducing powers needed for the biosynthesis of higher alcohols In such cases, the engineering strategy has to be revised by further modification of S. cerevisiae metabolism

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