ELONGATED HYPOCOTYL 5 regulates BRUTUS and affects Iron acquisition and homeostasis in Arabidopsis thaliana.

Abstract

Iron (Fe) is an essential micronutrient for both plants and animals. Fe limitation significantly reduces crop yield and adversely impacts on human nutrition. Owing to limited bioavailability of Fe in soil, plants have adapted different strategies that not only regulate Fe uptake and homeostasis but also brings modifications in root system architecture to enhance survival. Understanding the molecular mechanism underlying the root growth responses will have critical implications for plant breeding. Fe uptake is regulated by a cascade of basic helix-loop-helix (bHLH) transcription factors in plants. In this study, we report that HY5 (Elongated Hypocotyl 5), a member of the basic leucine zipper (bZIP) family of TFs plays an important role in the Fe deficiency signalling pathway in Arabidopsis thaliana. The hy5 mutant failed to mount optimum Fe deficiency responses and displayed root growth defects under Fe limitation. Our analysis revealed that the induction of the genes involved in Fe uptake pathway (FIT-FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR, FRO2-FERRIC REDUCTION OXIDASE 2 and IRT1-IRON-REGULATED TRANSPORTER1) is reduced in the hy5 mutant as compared to the wild-type plants under Fe deficiency. Moreover, we also found that the expression of coumarin biosynthesis genes is affected in the hy5 mutant under Fe deficiency. Our results also showed that HY5 negatively regulates BRUTUS (BTS) and POPEYE (PYE). Chromatin Immunoprecipitation followed by qPCR revealed direct binding of HY5 to the promoters of BTS, FRO2 and PYE. Altogether, our results showed that HY5 plays an important role in regulation of Fe deficiency responses in Arabidopsis.