Abstract

The TATA-binding protein (TBP) plays a central role in eukaryotic gene transcription. Given its key function in transcription initiation, TBP was initially thought to be an invariant protein. However, studies showed that TBP expression is upregulated by oncogenic signaling pathways. Furthermore, depending on the cell type, small increases in cellular TBP amounts can induce changes in cellular growth properties towards a transformed phenotype. Here we sought to identify the specific TBP-regulated gene targets that drive its ability to induce tumorigenesis. Using microarray analysis, our results reveal that increases in cellular TBP concentrations produce selective alterations in gene expression that include an enrichment for genes involved in angiogenesis. Accordingly, we find that TBP levels modulate VEGFA expression, the master regulator of angiogenesis. Increases in cellular TBP amounts induce VEGFA expression and secretion to enhance cell migration and tumor vascularization. TBP mediates changes in VEGFA transcription requiring its recruitment at a hypoxia-insensitive proximal TSS, revealing a mechanism for VEGF regulation under non-stress conditions. The results are clinically relevant as TBP expression is significantly increased in both colon adenocarcinomas as well as adenomas relative to normal tissue. Furthermore, TBP expression is positively correlated with VEGFA expression. Collectively, these studies support the idea that increases in TBP expression contribute to enhanced VEGFA transcription early in colorectal cancer development to drive tumorigenesis.

Highlights

  • TATA-binding protein (TBP) is used for the transcription of genes from all three nuclear RNA polymerases

  • Gene Set Enrichment Analysis (GSEA) further revealed that further revealed that TBP consistently alters the expression of genes involved in angiogenesis (Figure 1), (Q < 0.25, normalized enrichment score/Normalized Enrichment Score (NES) = 1.80)

  • Our analysis revealed that relatively small increases in TBP produce a limited number of gene expression changes

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Summary

Introduction

TATA-binding protein (TBP) is used for the transcription of genes from all three nuclear RNA polymerases (pols). TBP expression is regulated transcriptionally through signaling pathways that involve protein kinase C, HBV protein X, EGFR1, and EGFRvIII via Ras [1,2,3,4,5,6]. These Ras-mediated events rely on activation of all three classes of mitogen-activated kinases [3, 5, 6]. The TBP promoter is repressed through JNK2-dependent mechanisms and by direct recruitment of the repressor, Maf, both of which inhibit Elk-1 occupancy [8, 9]. Despite its central role in eukaryotic transcription, TBP expression is highly regulated through oncogenic signaling pathways

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