Abstract
Milkfish, an important aquaculture species in Asian countries, are traditionally cultured in outdoor-based systems. There, they experience potentially stressful fluctuations in environmental conditions, such as temperature, eliciting changes in fish physiology. While the importance of the gut microbiome for the welfare and performance of fish has been recognized, little is known about the effects of thermal stress on the gut microbiome of milkfish and its interactions with the host’s metabolism. We investigated the gut microbiome of juvenile milkfish in a thermal stress experiment, comparing control (26 °C) and elevated temperature (33 °C) treatments over three weeks, analyzing physiological biomarkers, gut microbiome composition, and tank water microbial communities using 16S amplicon sequencing. The gut microbiome was distinct from the tank water and dominated by Cetobacterium, Enterovibrio, and Vibrio. We observed a parallel succession in both temperature treatments, with microbial communities at 33 °C differing more strongly from the control after the initial temperature increase and becoming more similar towards the end of the experiment. As proxy for the fish’s energy status, HSI (hepatosomatic index) was correlated with gut microbiome composition. Our study showed that thermal stress induced changes in the milkfish gut microbiome, which may contribute to the host’s habituation to elevated temperatures over time.
Highlights
Milkfish (Chanos chanos) is a euryhaline, mainly herbivorous teleost of the Chanidae family and an important aquaculture species for tropical countries
After an acclimatization period of four weeks at 26 ◦ C, the temperature in three tanks was gradually increased from 26 ◦ C to 33 ◦ C by 1 ◦ C per day over the course of one week and kept constant at 33 ◦ C for three weeks (HT: high temperature treatment), while the remaining three tanks were kept at 26 ◦ C (CT: control treatment)
Water communities were dominated by heterotrophic taxa involved in organic matter degradation, such as representatives of the orders Alteromonadales, Flavobacteriales, Oceanospirillales, and Rhodobacterales (Figure 1B)
Summary
Milkfish (Chanos chanos) is a euryhaline, mainly herbivorous teleost of the Chanidae family and an important aquaculture species for tropical countries. With an annual global production of more than 1 Mt in the last years [1] and several Southeast Asian countries as main producers, milkfish plays a key role in providing affordable animal-based protein for the local population. Milkfish are traditionally cultured in outdoor-based systems in hypersaline lagoons, brackish-water ponds or marine systems, where they experience daily and/or seasonal variation in ambient conditions [2,3]. Water temperature can reach limits at 15 and 40 ◦ C during cold snaps or heat waves [2].
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