Abstract

Banana is an important tropical fruit with high economic value. One of the main cultivars (‘Cavendish’) is susceptible to low temperatures, while another closely related specie (‘Dajiao’) has considerably higher cold tolerance. We previously reported that some membrane proteins appear to be involved in the cold tolerance of Dajiao bananas via an antioxidation mechanism. To investigate the early cold stress response of Dajiao, here we applied comparative membrane proteomics analysis for both cold-sensitive Cavendish and cold-tolerant Dajiao bananas subjected to cold stress at 10°C for 0, 3, and 6 h. A total of 2,333 and 1,834 proteins were identified in Cavendish and Dajiao, respectively. Subsequent bioinformatics analyses showed that 692 Cavendish proteins and 524 Dajiao proteins were predicted to be membrane proteins, of which 82 and 137 differentially abundant membrane proteins (DAMPs) were found in Cavendish and Dajiao, respectively. Interestingly, the number of DAMPs with increased abundance following 3 h of cold treatment in Dajiao (80) was seven times more than that in Cavendish (11). Gene ontology molecular function analysis of DAMPs for Cavendish and Dajiao indicated that they belong to eight categories including hydrolase activity, binding, transporter activity, antioxidant activity, etc., but the number in Dajiao is twice that in Cavendish. Strikingly, we found peroxidases (PODs) and aquaporins among the protein groups whose abundance was significantly increased after 3 h of cold treatment in Dajiao. Some of the PODs and aquaporins were verified by reverse-transcription PCR, multiple reaction monitoring, and green fluorescent protein-based subcellular localization analysis, demonstrating that the global membrane proteomics data are reliable. By combining the physiological and biochemical data, we found that membrane-bound Peroxidase 52 and Peroxidase P7, and aquaporins (MaPIP1;1, MaPIP1;2, MaPIP2;4, MaPIP2;6, MaTIP1;3) are mainly involved in decreased lipid peroxidation and maintaining leaf cell water potential, which appear to be the key cellular adaptations contributing to the cold tolerance of Dajiao. This membrane proteomics study provides new insights into cold stress tolerance mechanisms of banana, toward potential applications for ultimate genetic improvement of cold tolerance in banana.

Highlights

  • Many of our existing staple crop species originating from tropical and subtropical regions are susceptible to damage when temperatures fall below 10◦C, affecting growth, development, crop production, and geographical distribution of crop species (Lee et al, 2004)

  • We found that high levels of reactive oxygen species (ROS) accumulated in the cell when plants were exposed to low temperature

  • We implemented an effective method by combining isobaric tags for relative and absolute quantification (iTRAQ)-based membrane proteomics analysis with the use of transmembrane structure prediction software to identify candidate membrane protein (MP) differentially regulated in response to cold stress toward understanding the plausible mechanism of cold tolerance

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Summary

Introduction

Many of our existing staple crop species originating from tropical and subtropical regions are susceptible to damage when temperatures fall below 10◦C, affecting growth, development, crop production, and geographical distribution of crop species (Lee et al, 2004). Banana (Musa spp.) is one of the most productive fruits in the world, and the most important grain crop following rice, wheat, and maize in many developing countries. It originates in the tropics, and its growth is completely arrested and injured at 8◦C. The extent of chilling injury is dependent on the intensity of cold exposure (temperature and duration). Dajiao has been used as an excellent test case for investigation of cold-tolerance mechanisms in banana (Yang et al, 2012, 2015)

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